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SDF2L1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:14.3 nTPM
HPA:14.3 nTPM
GTEx:21.6 nTPM
FANTOM5:4.7 Scaled Tags Per Million
Mouse:11.4 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005638
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.3
Sample id Sample description nTPM
Hippocampus
nTPM: 13.8
1898 Male, age 80, left hemisphere 15.9
2529 Female, age 94, left hemisphere 14.5
2148 Female, age 91, left hemisphere 14.0
2621 Female, age 67, right hemisphere 13.2
1911 Female, age 85, right hemisphere 13.0
1855 Male, age 76, left hemisphere 12.6
Dentate gyrus
nTPM: 14.3
2010 Male, age 76, both hemispheres 17.3
2530 Female, age 94, left hemisphere 16.0
2528 Male, age 74, both hemispheres 14.5
1927 Female, age 91, both hemispheres 13.3
2531 Female, age 67, both hemispheres 12.7
2246 Female, age 85, both hemispheres 12.0
Entorhinal gyrus
nTPM: 13.0
2117 Female, age 91, right hemisphere 15.5
1938 Female, age 85, left hemisphere 13.4
1787 Male, age 76, left hemisphere 13.2
2764 Male, age 80, right hemisphere 12.3
2613 Female, age 94, left hemisphere 12.1
2686 Male, age 75, right hemisphere 11.4
Hippocampus, CA1
nTPM: 13.4
1873 Female, age 85, both hemispheres 15.1
2045 Male, age 76, both hemispheres 13.4
2527 Male, age 74, both hemispheres 13.1
2749 Male, age 80, left hemisphere 12.9
2082 Female, age 91, right hemisphere 12.7
Hippocampus, CA2
nTPM: 13.5
2249 Male, age 74, both hemispheres 14.4
1963 Male, age 80, left hemisphere 13.9
1940 Female, age 85, left hemisphere 13.5
1892 Male, age 76, both hemispheres 13.3
2113 Female, age 91, right hemisphere 13.2
2437 Female, age 94, left hemisphere 12.7
Hippocampus, CA3
nTPM: 13.4
1867 Male, age 76, both hemispheres 15.3
2436 Male, age 74, both hemispheres 15.3
2861 Female, age 67, both hemispheres 12.8
1891 Female, age 85, both hemispheres 12.7
2620 Female, age 94, left hemisphere 12.6
2137 Male, age 80, left hemisphere 11.6
Parahippocampal cortex
nTPM: 12.5
2018 Male, age 76, both hemispheres 14.1
2250 Female, age 67, right hemisphere 14.1
2245 Female, age 91, both hemispheres 13.1
1990 Female, age 91, right hemisphere 13.0
1933 Female, age 85, both hemispheres 12.6
2532 Female, age 72, left hemisphere 12.4
2692 Male, age 74, both hemispheres 12.1
2622 Female, age 67, right hemisphere 11.4
1850 Male, age 80, both hemispheres 11.3
2693 Female, age 94, both hemispheres 10.8
Perirhinal gyrus
nTPM: 12.0
1841 Female, age 85, right hemisphere 12.6
1847 Female, age 91, left hemisphere 12.3
2521 Female, age 94, right hemisphere 12.1
1794 Male, age 80, right hemisphere 11.5
2848 Male, age 76, right hemisphere 11.5
Subiculum
nTPM: 12.7
2042 Male, age 76, both hemispheres 14.2
1977 Female, age 85, both hemispheres 12.9
2729 Female, age 91, right hemisphere 12.9
1901 Male, age 80, both hemispheres 12.7
2619 Male, age 74, both hemispheres 12.0
2438 Female, age 94, left hemisphere 11.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.6
Samples: 197

Max nTPM: 106.3
Min nTPM: 4.3
Std nTPM: 11.2
Median nTPM: 19.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 106.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 76.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 61.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 51.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 48.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 47.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 46.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 45.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 43.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 43.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 43.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.7
FF:10153-102I9 76 years, female 7.3
FF:10169-103B7 60 years, female 2.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.5
Samples: 4

Max nTPM: 11.5
Min nTPM: 8.5
Sample A Male 8.6
Sample B Male 8.5
Sample C Female 11.5
Sample D Female 9.5
Hippocampal formation
nTPM: 11.4
Samples: 4

Max nTPM: 14.3
Min nTPM: 8.4
Sample A Male 9.3
Sample B Male 8.4
Sample C Female 13.7
Sample D Female 14.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
71656749 Antisense, RP_050927_04_C04, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.