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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:21.7 nTPM
HPA:21.7 nTPM
GTEx:33.6 nTPM
FANTOM5:176.5 Scaled Tags Per Million
Pig:16.5 nTPM
Mouse:14.3 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050894
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.7
Sample id Sample description nTPM
Hippocampus
nTPM: 21.7
2529 Female, age 94, left hemisphere 25.3
2621 Female, age 67, right hemisphere 24.7
2148 Female, age 91, left hemisphere 23.3
1911 Female, age 85, right hemisphere 20.6
1855 Male, age 76, left hemisphere 20.4
1898 Male, age 80, left hemisphere 16.2
Dentate gyrus
nTPM: 21.6
2531 Female, age 67, both hemispheres 28.1
2530 Female, age 94, left hemisphere 24.3
2246 Female, age 85, both hemispheres 23.8
2528 Male, age 74, both hemispheres 19.1
1927 Female, age 91, both hemispheres 17.6
2010 Male, age 76, both hemispheres 16.6
Entorhinal gyrus
nTPM: 21.2
2686 Male, age 75, right hemisphere 27.6
2613 Female, age 94, left hemisphere 21.9
2117 Female, age 91, right hemisphere 20.7
1787 Male, age 76, left hemisphere 19.7
2764 Male, age 80, right hemisphere 19.1
1938 Female, age 85, left hemisphere 18.2
Hippocampus, CA1
nTPM: 19.6
2527 Male, age 74, both hemispheres 23.8
1873 Female, age 85, both hemispheres 21.0
2082 Female, age 91, right hemisphere 19.1
2045 Male, age 76, both hemispheres 17.4
2749 Male, age 80, left hemisphere 16.8
Hippocampus, CA2
nTPM: 18.7
2437 Female, age 94, left hemisphere 22.1
1940 Female, age 85, left hemisphere 21.1
2113 Female, age 91, right hemisphere 19.6
1892 Male, age 76, both hemispheres 17.6
2249 Male, age 74, both hemispheres 16.8
1963 Male, age 80, left hemisphere 14.9
Hippocampus, CA3
nTPM: 21.5
2861 Female, age 67, both hemispheres 28.8
2620 Female, age 94, left hemisphere 25.0
1891 Female, age 85, both hemispheres 20.4
2137 Male, age 80, left hemisphere 19.2
2436 Male, age 74, both hemispheres 18.7
1867 Male, age 76, both hemispheres 17.2
Parahippocampal cortex
nTPM: 21.7
2622 Female, age 67, right hemisphere 28.8
2245 Female, age 91, both hemispheres 25.5
2692 Male, age 74, both hemispheres 24.6
2532 Female, age 72, left hemisphere 23.1
2693 Female, age 94, both hemispheres 21.5
1933 Female, age 85, both hemispheres 19.1
1990 Female, age 91, right hemisphere 18.9
2250 Female, age 67, right hemisphere 18.8
2018 Male, age 76, both hemispheres 18.5
1850 Male, age 80, both hemispheres 18.0
Perirhinal gyrus
nTPM: 18.9
2848 Male, age 76, right hemisphere 20.4
1841 Female, age 85, right hemisphere 20.3
2521 Female, age 94, right hemisphere 18.9
1794 Male, age 80, right hemisphere 18.4
1847 Female, age 91, left hemisphere 16.7
Subiculum
nTPM: 20.9
2438 Female, age 94, left hemisphere 24.2
2619 Male, age 74, both hemispheres 23.3
2042 Male, age 76, both hemispheres 20.1
1901 Male, age 80, both hemispheres 19.8
1977 Female, age 85, both hemispheres 19.4
2729 Female, age 91, right hemisphere 18.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.6
Samples: 197

Max nTPM: 92.2
Min nTPM: 16.5
Std nTPM: 8.1
Median nTPM: 33.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 92.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 55.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 51.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 51.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 50.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 49.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 48.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 48.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 47.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 47.5
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 46.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 176.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 176.5
FF:10169-103B7 60 years, female 190.4
FF:10153-102I9 76 years, female 162.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 18.5
Min nTPM: 14.5
Sample A Female 14.7
Sample B Female 14.5
Sample C Male 16.3
Sample D Male 18.5
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 18.3
Min nTPM: 14.0
Sample A Female 15.7
Sample B Female 15.2
Sample C Male 14.0
Sample D Male 18.3
Subiculum
nTPM: 16.6
Samples: 4

Max nTPM: 17.5
Min nTPM: 15.3
Sample A Female 17.5
Sample B Female 15.3
Sample C Male 17.5
Sample D Male 15.9
Ventral hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 18.8
Min nTPM: 14.7
Sample A Female 14.7
Sample B Female 15.3
Sample C Male 16.9
Sample D Male 18.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 13.0
Min nTPM: 12.1
Sample A Male 13.0
Sample B Male 12.4
Sample C Female 12.8
Sample D Female 12.1
Hippocampal formation
nTPM: 14.3
Samples: 4

Max nTPM: 16.6
Min nTPM: 12.2
Sample A Male 12.2
Sample B Male 16.6
Sample C Female 14.0
Sample D Female 14.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
69816822 Antisense, RP_050510_01_H11, Mouse strain C57BL/6J (56 days, male) 3.3

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The Human Protein Atlas

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