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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:40.4 nTPM
HPA:40.4 nTPM
GTEx:40.1 nTPM
FANTOM5:38.4 Scaled Tags Per Million
Pig:49.3 nTPM
Mouse:40.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005651
Glial cells High
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.4
Sample id Sample description nTPM
Hippocampus
nTPM: 40.4
2529 Female, age 94, left hemisphere 43.5
2148 Female, age 91, left hemisphere 42.1
1898 Male, age 80, left hemisphere 41.2
2621 Female, age 67, right hemisphere 40.4
1911 Female, age 85, right hemisphere 38.1
1855 Male, age 76, left hemisphere 36.8
Dentate gyrus
nTPM: 39.0
2530 Female, age 94, left hemisphere 41.1
2528 Male, age 74, both hemispheres 39.5
2246 Female, age 85, both hemispheres 38.7
2531 Female, age 67, both hemispheres 38.6
1927 Female, age 91, both hemispheres 38.3
2010 Male, age 76, both hemispheres 37.5
Entorhinal gyrus
nTPM: 39.0
2117 Female, age 91, right hemisphere 41.8
2764 Male, age 80, right hemisphere 39.6
2686 Male, age 75, right hemisphere 38.8
1938 Female, age 85, left hemisphere 38.7
1787 Male, age 76, left hemisphere 38.0
2613 Female, age 94, left hemisphere 37.4
Hippocampus, CA1
nTPM: 39.7
2749 Male, age 80, left hemisphere 45.2
2527 Male, age 74, both hemispheres 42.0
1873 Female, age 85, both hemispheres 38.0
2082 Female, age 91, right hemisphere 37.7
2045 Male, age 76, both hemispheres 35.9
Hippocampus, CA2
nTPM: 39.6
1963 Male, age 80, left hemisphere 42.8
1892 Male, age 76, both hemispheres 40.6
2249 Male, age 74, both hemispheres 39.7
1940 Female, age 85, left hemisphere 38.7
2437 Female, age 94, left hemisphere 38.5
2113 Female, age 91, right hemisphere 37.0
Hippocampus, CA3
nTPM: 39.8
2137 Male, age 80, left hemisphere 41.0
2436 Male, age 74, both hemispheres 40.4
2861 Female, age 67, both hemispheres 40.4
1867 Male, age 76, both hemispheres 39.3
2620 Female, age 94, left hemisphere 39.1
1891 Female, age 85, both hemispheres 38.2
Parahippocampal cortex
nTPM: 38.2
2245 Female, age 91, both hemispheres 39.8
2692 Male, age 74, both hemispheres 39.3
2622 Female, age 67, right hemisphere 38.9
2250 Female, age 67, right hemisphere 38.6
2532 Female, age 72, left hemisphere 38.6
1850 Male, age 80, both hemispheres 38.4
1990 Female, age 91, right hemisphere 38.4
1933 Female, age 85, both hemispheres 38.0
2018 Male, age 76, both hemispheres 36.3
2693 Female, age 94, both hemispheres 35.4
Perirhinal gyrus
nTPM: 37.8
1794 Male, age 80, right hemisphere 39.1
1847 Female, age 91, left hemisphere 38.3
1841 Female, age 85, right hemisphere 38.0
2521 Female, age 94, right hemisphere 37.4
2848 Male, age 76, right hemisphere 36.3
Subiculum
nTPM: 38.9
2619 Male, age 74, both hemispheres 40.5
1901 Male, age 80, both hemispheres 39.4
2729 Female, age 91, right hemisphere 39.0
1977 Female, age 85, both hemispheres 38.8
2438 Female, age 94, left hemisphere 38.8
2042 Male, age 76, both hemispheres 37.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.1
Samples: 197

Max nTPM: 75.3
Min nTPM: 16.3
Std nTPM: 8.3
Median nTPM: 38.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 75.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 73.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 63.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 61.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 59.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 59.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 56.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 55.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 54.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 54.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 54.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.4
FF:10153-102I9 76 years, female 45.4
FF:10169-103B7 60 years, female 31.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 67.1
Min nTPM: 33.0
Sample A Female 67.1
Sample B Female 41.2
Sample C Male 49.8
Sample D Male 33.0
Entorhinal cortex
nTPM: 49.3
Samples: 4

Max nTPM: 59.8
Min nTPM: 38.8
Sample A Female 48.4
Sample B Female 50.2
Sample C Male 59.8
Sample D Male 38.8
Subiculum
nTPM: 37.8
Samples: 4

Max nTPM: 53.9
Min nTPM: 30.5
Sample A Female 53.9
Sample B Female 32.6
Sample C Male 34.2
Sample D Male 30.5
Ventral hippocampus
nTPM: 44.2
Samples: 4

Max nTPM: 51.3
Min nTPM: 34.3
Sample A Female 45.1
Sample B Female 34.3
Sample C Male 51.3
Sample D Male 45.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.0
Samples: 4

Max nTPM: 43.5
Min nTPM: 38.6
Sample A Male 42.4
Sample B Male 38.6
Sample C Female 39.3
Sample D Female 43.5
Hippocampal formation
nTPM: 39.5
Samples: 4

Max nTPM: 40.9
Min nTPM: 38.2
Sample A Male 40.9
Sample B Male 38.2
Sample C Female 39.3
Sample D Female 39.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69080513 Antisense, RP_050324_02_C02, Mouse strain C57BL/6J (56 days, male) 0.1

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