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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:44.2 nTPM
HPA:44.2 nTPM
GTEx:33.6 nTPM
FANTOM5:30.7 Scaled Tags Per Million
Pig:4.8 nTPM
Mouse:14.4 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045063
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.2
Sample id Sample description nTPM
Hippocampus
nTPM: 43.7
2529 Female, age 94, left hemisphere 46.5
1898 Male, age 80, left hemisphere 45.1
2621 Female, age 67, right hemisphere 44.0
1855 Male, age 76, left hemisphere 43.3
2148 Female, age 91, left hemisphere 42.2
1911 Female, age 85, right hemisphere 41.1
Dentate gyrus
nTPM: 41.6
2528 Male, age 74, both hemispheres 46.2
2530 Female, age 94, left hemisphere 43.2
2010 Male, age 76, both hemispheres 42.4
2246 Female, age 85, both hemispheres 42.3
2531 Female, age 67, both hemispheres 38.4
1927 Female, age 91, both hemispheres 36.8
Entorhinal gyrus
nTPM: 43.4
2117 Female, age 91, right hemisphere 50.4
1787 Male, age 76, left hemisphere 45.3
2613 Female, age 94, left hemisphere 42.3
1938 Female, age 85, left hemisphere 41.2
2764 Male, age 80, right hemisphere 41.1
2686 Male, age 75, right hemisphere 39.7
Hippocampus, CA1
nTPM: 40.5
2527 Male, age 74, both hemispheres 45.6
2082 Female, age 91, right hemisphere 42.8
2045 Male, age 76, both hemispheres 39.7
1873 Female, age 85, both hemispheres 39.5
2749 Male, age 80, left hemisphere 35.1
Hippocampus, CA2
nTPM: 42.9
1940 Female, age 85, left hemisphere 49.2
2113 Female, age 91, right hemisphere 43.3
2249 Male, age 74, both hemispheres 42.5
2437 Female, age 94, left hemisphere 42.5
1963 Male, age 80, left hemisphere 41.6
1892 Male, age 76, both hemispheres 38.0
Hippocampus, CA3
nTPM: 39.9
2436 Male, age 74, both hemispheres 43.7
1867 Male, age 76, both hemispheres 41.8
1891 Female, age 85, both hemispheres 40.8
2861 Female, age 67, both hemispheres 40.0
2620 Female, age 94, left hemisphere 37.3
2137 Male, age 80, left hemisphere 35.9
Parahippocampal cortex
nTPM: 41.4
2018 Male, age 76, both hemispheres 45.6
2250 Female, age 67, right hemisphere 44.6
2692 Male, age 74, both hemispheres 42.6
2622 Female, age 67, right hemisphere 41.7
2245 Female, age 91, both hemispheres 40.9
2532 Female, age 72, left hemisphere 40.9
1990 Female, age 91, right hemisphere 40.8
1850 Male, age 80, both hemispheres 39.9
1933 Female, age 85, both hemispheres 38.9
2693 Female, age 94, both hemispheres 38.0
Perirhinal gyrus
nTPM: 40.4
1794 Male, age 80, right hemisphere 43.3
1841 Female, age 85, right hemisphere 40.6
2521 Female, age 94, right hemisphere 40.0
1847 Female, age 91, left hemisphere 39.8
2848 Male, age 76, right hemisphere 38.1
Subiculum
nTPM: 44.2
2042 Male, age 76, both hemispheres 49.0
2619 Male, age 74, both hemispheres 46.5
2729 Female, age 91, right hemisphere 46.2
2438 Female, age 94, left hemisphere 42.9
1977 Female, age 85, both hemispheres 40.5
1901 Male, age 80, both hemispheres 40.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.6
Samples: 197

Max nTPM: 101.0
Min nTPM: 12.3
Std nTPM: 12.0
Median nTPM: 32.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 101.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 77.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 71.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 62.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 61.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 59.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 58.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 57.5
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 57.0
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 52.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 52.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.7
FF:10153-102I9 76 years, female 41.5
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.3
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.3
Sample A Female 3.3
Sample B Female 4.4
Sample C Male 4.1
Sample D Male 5.3
Entorhinal cortex
nTPM: 4.7
Samples: 4

Max nTPM: 5.6
Min nTPM: 4.1
Sample A Female 4.6
Sample B Female 4.1
Sample C Male 4.5
Sample D Male 5.6
Subiculum
nTPM: 4.9
Samples: 4

Max nTPM: 5.5
Min nTPM: 3.5
Sample A Female 3.5
Sample B Female 5.2
Sample C Male 5.2
Sample D Male 5.5
Ventral hippocampus
nTPM: 4.7
Samples: 4

Max nTPM: 5.6
Min nTPM: 4.3
Sample A Female 4.7
Sample B Female 5.6
Sample C Male 4.3
Sample D Male 4.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.5
Samples: 4

Max nTPM: 13.5
Min nTPM: 5.7
Sample A Male 11.6
Sample B Male 13.5
Sample C Female 5.7
Sample D Female 7.3
Hippocampal formation
nTPM: 14.4
Samples: 4

Max nTPM: 20.7
Min nTPM: 7.7
Sample A Male 13.0
Sample B Male 16.3
Sample C Female 7.7
Sample D Female 20.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69782264 Antisense, RP_050505_02_F05, Mouse strain C57BL/6J (56 days, male) 0.2
71670490 Antisense, RP_050505_02_F05, Mouse strain C57BL/6J (56 days, male) 0.1
70919424 Antisense, RP_050713_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.