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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		74.740
RNA expressioni
Consensus:135.6 nTPM
HPA:135.6 nTPM
GTEx:65.6 nTPM
FANTOM5:593.7 Scaled Tags Per Million
Pig:224.3 nTPM
Mouse:98.8 nTPM
Allen mouse:27.2 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA022275
Amygdala mean intensity 74.740
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 55.713
Basal medial amygdaloid nucleus 66.287
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 43.707
Cortical amygdala 64.606
Central amygdala 49.801
Medial amygdaloid nucleus 55.593

AMYGDALA - HPA Brain RNA-seq
Max nTPM 135.6
Sample id Sample description nTPM
Amygdala
nTPM: 112.6
2814 Male, age 76, right hemisphere 334.1
2514 Male, age 75, right hemisphere 76.0
1987 Female, age 91, left hemisphere 65.3
2695 Female, age 67, right hemisphere 51.1
2517 Female, age 94, left hemisphere 36.5
Basal amygdala
nTPM: 77.8
1955 Male, age 76, both hemispheres 181.5
2243 Female, age 91, right hemisphere 90.3
2110 Male, age 80, left hemisphere 83.2
2685 Female, age 94, left hemisphere 47.1
2609 Male, age 75, right hemisphere 36.2
2827 Female, age 67, right hemisphere 28.3
Central amygdala
nTPM: 135.6
1905 Male, age 76, both hemispheres 314.8
2239 Male, age 80, left hemisphere 108.6
2515 Male, age 75, right hemisphere 107.6
2826 Female, age 94, left hemisphere 103.4
2701 Female, age 91, right hemisphere 43.8
Corticomedial amygdala
nTPM: 83.3
2240 Male, age 76, both hemispheres 204.0
2829 Male, age 80, left hemisphere 89.9
2242 Female, age 91, right hemisphere 83.5
2429 Female, age 94, left hemisphere 44.1
2535 Female, age 67, right hemisphere 39.3
2428 Male, age 75, right hemisphere 38.9
Lateral amygdala
nTPM: 95.9
1883 Male, age 76, both hemispheres 282.2
2534 Female, age 94, left hemisphere 136.6
2516 Male, age 75, right hemisphere 76.6
2256 Male, age 80, left hemisphere 46.1
2830 Female, age 67, right hemisphere 22.0
2255 Female, age 91, right hemisphere 12.0
Stria terminalis, bed nucleus
nTPM: 127.7
1974 Female, age 91, both hemispheres 218.4
2486 Female, age 94, both hemispheres 119.9
2201 Male, age 74, unknown 45.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 65.6
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 65.6
Samples: 152

Max nTPM: 205.4
Min nTPM: 15.4
Std nTPM: 26.9
Median nTPM: 60.7
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 205.4
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 189.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 152.2
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 145.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 138.0
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 126.0
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 120.0
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 117.1
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 113.4
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 107.7
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 105.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 593.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 593.7
FF:10151-102I7 76 years, female 593.7

AMYGDALA - Pig RNA-seqi
Average nTPM 224.3
Pig sample Sample description nTPM
Amygdala
nTPM: 224.3
Samples: 4

Max nTPM: 312.3
Min nTPM: 152.5
Sample A Female 312.3
Sample B Female 152.5
Sample C Male 190.9
Sample D Male 241.6

AMYGDALA - Mouse RNA-seqi
Average nTPM 98.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 98.8
Samples: 4

Max nTPM: 121.0
Min nTPM: 84.0
Sample A Male 121.0
Sample B Male 84.0
Sample C Female 90.7
Sample D Female 99.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 27.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 27.2
71570737 Antisense, RP_050505_01_H06, Mouse strain C57BL/6J (56 days, male) 34.0
73834355 Antisense, RP_051212_03_G08, Mouse strain C57BL/6J (56 days, male) 20.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.