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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		122.998
RNA expressioni
Consensus:280.9 nTPM
HPA:280.9 nTPM
GTEx:238.1 nTPM
FANTOM5:217.7 Scaled Tags Per Million
Pig:30.7 nTPM
Mouse:156.1 nTPM
Allen mouse:20.8 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA048630
Amygdala mean intensity 122.998
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 82.945
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 61.041
Cortical amygdala 96.648
Central amygdala 91.582
Medial amygdaloid nucleus 122.998

AMYGDALA - HPA Brain RNA-seq
Max nTPM 280.9
Sample id Sample description nTPM
Amygdala
nTPM: 280.9
2695 Female, age 67, right hemisphere 365.4
2814 Male, age 76, right hemisphere 289.3
1987 Female, age 91, left hemisphere 252.9
2514 Male, age 75, right hemisphere 250.1
2517 Female, age 94, left hemisphere 246.9
Basal amygdala
nTPM: 261.5
2609 Male, age 75, right hemisphere 321.5
2243 Female, age 91, right hemisphere 282.6
1955 Male, age 76, both hemispheres 251.8
2110 Male, age 80, left hemisphere 248.6
2685 Female, age 94, left hemisphere 242.6
2827 Female, age 67, right hemisphere 221.7
Central amygdala
nTPM: 258.8
1905 Male, age 76, both hemispheres 287.0
2515 Male, age 75, right hemisphere 270.8
2826 Female, age 94, left hemisphere 252.2
2701 Female, age 91, right hemisphere 242.2
2239 Male, age 80, left hemisphere 241.9
Corticomedial amygdala
nTPM: 264.7
2829 Male, age 80, left hemisphere 322.2
2428 Male, age 75, right hemisphere 276.1
2242 Female, age 91, right hemisphere 266.5
2240 Male, age 76, both hemispheres 248.7
2429 Female, age 94, left hemisphere 237.7
2535 Female, age 67, right hemisphere 237.3
Lateral amygdala
nTPM: 254.8
2516 Male, age 75, right hemisphere 291.4
1883 Male, age 76, both hemispheres 264.9
2256 Male, age 80, left hemisphere 263.8
2255 Female, age 91, right hemisphere 253.3
2534 Female, age 94, left hemisphere 239.0
2830 Female, age 67, right hemisphere 216.2
Stria terminalis, bed nucleus
nTPM: 240.7
2486 Female, age 94, both hemispheres 270.7
1974 Female, age 91, both hemispheres 232.3
2201 Male, age 74, unknown 218.9

AMYGDALA - GTEx RNA-seqi
Average nTPM 238.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 238.1
Samples: 152

Max nTPM: 711.3
Min nTPM: 8.7
Std nTPM: 100.7
Median nTPM: 224.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 711.3
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 672.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 475.4
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 458.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 456.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 428.1
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 408.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 407.2
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 389.8
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 387.9
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 385.9
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 217.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 217.7
FF:10151-102I7 76 years, female 217.7

AMYGDALA - Pig RNA-seqi
Average nTPM 30.7
Pig sample Sample description nTPM
Amygdala
nTPM: 30.7
Samples: 4

Max nTPM: 35.6
Min nTPM: 17.5
Sample A Female 35.4
Sample B Female 34.1
Sample C Male 17.5
Sample D Male 35.6

AMYGDALA - Mouse RNA-seqi
Average nTPM 156.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 156.1
Samples: 4

Max nTPM: 210.9
Min nTPM: 100.8
Sample A Male 100.8
Sample B Male 155.2
Sample C Female 210.9
Sample D Female 157.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 20.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 20.8
576432 Antisense, RP_040826_01_H06, Mouse strain C57BL/6J (56 days, male) 23.0
73732146 Antisense, RP_051121_04_A04, Mouse strain C57BL/6J (56 days, male) 18.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.