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PPP1R1B
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:275.5 nTPM
HPA:275.5 nTPM
GTEx:216.8 nTPM
FANTOM5:85.4 Scaled Tags Per Million
Pig:61.2 nTPM
Mouse:19.9 nTPM
Allen mouse:6.6 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 275.5
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 237.9
2828 Female, age 72, unknown 295.3
2586 Male, age 75, left hemisphere 290.2
1827 Male, age 72, unknown 246.5
2666 Male, age 74, left hemisphere 234.1
1833 Male, age 53, unknown 231.5
1870 Female, age 42, unknown 225.0
1830 Male, age 51, unknown 221.5
2019 Male, age 18, unknown 216.1
2219 Male, age 76, both hemispheres 210.6
2411 Female, age 72, unknown 207.7
Dorsal raphe nucleus
nTPM: 221.0
2016 Female, age 72, unknown 239.8
1828 Male, age 53, unknown 235.4
2298 Female, age 72, unknown 213.2
2047 Male, age 72, unknown 209.3
2750 Male, age 76, both hemispheres 207.5
Inferior colliculus
nTPM: 249.7
2849 Male, age 72, unknown 270.4
1848 Female, age 42, unknown 261.4
1890 Male, age 53, unknown 242.1
2097 Female, age 72, unknown 224.9
Median raphe nucleus
nTPM: 205.8
2220 Male, age 76, midline 205.8
Pedunculopontine tegmental nucleus
nTPM: 205.7
1921 Female, age 85, both hemispheres 226.2
2334 Male, age 80, both hemispheres 208.1
2338 Male, age 61, both hemispheres 183.0
Periaquaductal grey, anterior
nTPM: 250.3
1795 Male, age 51, unknown 263.6
2502 Female, age 75, unknown 257.4
1947 Male, age 18, unknown 229.9
Periaquaductal grey, dorsal
nTPM: 275.5
1831 Male, age 72, unknown 292.9
2850 Male, age 76, both hemispheres 292.6
1840 Male, age 53, unknown 281.0
2464 Female, age 72, unknown 235.6
Periaquaductal grey, lateral
nTPM: 261.9
2053 Male, age 18, unknown 278.3
2140 Male, age 76, both hemispheres 275.0
2272 Male, age 74, both hemispheres 232.5
Pretectal area
nTPM: 266.5
2667 Female, age 75, unknown 297.8
2273 Male, age 74, both hemispheres 293.6
1816 Male, age 51, unknown 281.0
2407 Male, age 75, both hemispheres 275.0
1944 Female, age 72, unknown 273.8
2316 Male, age 76, right hemisphere 271.2
1815 Male, age 53, unknown 271.0
1817 Female, age 42, unknown 264.2
2825 Male, age 18, unknown 249.9
2007 Male, age 72, unknown 229.1
2224 Female, age 72, unknown 224.8
Red nucleus
nTPM: 232.1
2503 Female, age 72, unknown 246.9
2588 Male, age 74, left hemisphere 239.8
2823 Male, age 76, right hemisphere 237.0
2769 Male, age 72, unknown 236.5
2227 Male, age 72, unknown 235.5
2725 Female, age 75, unknown 230.5
1821 Female, age 72, unknown 229.0
2584 Male, age 75, left hemisphere 229.0
1904 Male, age 53, unknown 228.7
1954 Female, age 42, unknown 226.1
1865 Male, age 51, unknown 224.0
2785 Male, age 18, unknown 222.6
Substantia nigra
nTPM: 243.9
2699 Male, age 18, unknown 313.3
1889 Female, age 72, unknown 255.5
1851 Male, age 51, unknown 251.3
1916 Female, age 42, unknown 246.4
2583 Male, age 75, right hemisphere 241.7
2409 Female, age 72, unknown 234.1
2665 Male, age 74, both hemispheres 232.6
2590 Female, age 75, unknown 226.1
2241 Male, age 72, unknown 224.4
1941 Male, age 53, unknown 214.0
Superior colliculus
nTPM: 274.7
2664 Male, age 75, both hemispheres 354.5
1995 Male, age 72, unknown 289.3
1796 Male, age 53, unknown 285.4
2087 Female, age 72, unknown 277.6
2261 Male, age 18, unknown 269.8
1839 Male, age 51, unknown 267.2
2668 Female, age 75, unknown 255.2
2587 Male, age 74, left hemisphere 255.0
1913 Female, age 42, unknown 253.3
1895 Male, age 76, right hemisphere 239.3
Ventral tegmental area
nTPM: 225.2
1915 Female, age 42, unknown 238.0
2021 Male, age 53, unknown 226.9
2223 Female, age 72, unknown 224.7
2410 Female, age 72, unknown 222.3
2218 Male, age 76, both hemispheres 220.7
1942 Male, age 51, unknown 218.5

MIDBRAIN - GTEx RNA-seqi
Average nTPM 216.8
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 216.8
Samples: 139

Max nTPM: 1738.9
Min nTPM: 27.6
Std nTPM: 173.5
Median nTPM: 188.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 1738.9
GTEX-13OVJ-0011-R2b-SM-5L3GP 50-59 years, female 626.1
GTEX-13SLW-0011-R2b-SM-5O9C6 70-79 years, male 551.2
GTEX-15EO6-0011-R2a-SM-6M46R 50-59 years, male 548.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 499.6
GTEX-1GMR8-0011-R2a-SM-CE6RD 50-59 years, female 466.1
GTEX-14PJO-0011-R2a-SM-5ZZVF 60-69 years, male 459.8
GTEX-1I1GS-0011-R2b-SM-CMKHG 60-69 years, male 440.1
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 432.8
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 431.1
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 422.2
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 85.4
FF:10158-103A5 76 years, female 85.4

MIDBRAIN - Pig RNA-seqi
Average nTPM 61.2
Pig sample Sample description nTPM
Midbrain
nTPM: 26.3
Samples: 4

Max nTPM: 36.5
Min nTPM: 19.3
Sample A Female 28.0
Sample B Female 19.3
Sample C Male 36.5
Sample D Male 21.4
Periaqueductal gray
nTPM: 49.6
Samples: 3

Max nTPM: 62.1
Min nTPM: 28.1
Sample B Female 28.1
Sample C Male 58.5
Sample D Male 62.1
Substantia nigra
nTPM: 31.6
Samples: 4

Max nTPM: 46.0
Min nTPM: 18.7
Sample A Female 18.7
Sample B Female 46.0
Sample C Male 27.2
Sample D Male 34.4
Superior colliculi
nTPM: 61.2
Samples: 4

Max nTPM: 112.7
Min nTPM: 38.5
Sample A Female 53.9
Sample B Female 112.7
Sample C Male 39.7
Sample D Male 38.5

MIDBRAIN - Mouse RNA-seqi
Average nTPM 19.9
Mouse sample Sample description nTPM
Midbrain
nTPM: 19.9
Samples: 4

Max nTPM: 23.5
Min nTPM: 16.8
Sample A Male 18.8
Sample B Male 20.5
Sample C Female 16.8
Sample D Female 23.5

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 6.6
576432 Antisense, RP_040826_01_H06, Mouse strain C57BL/6J (56 days, male) 10.9
73732146 Antisense, RP_051121_04_A04, Mouse strain C57BL/6J (56 days, male) 2.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.