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PEX11B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:36.3 nTPM
HPA:36.3 nTPM
GTEx:38.2 nTPM
FANTOM5:29.0 Scaled Tags Per Million
Mouse:62.9 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050104
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.3
Sample id Sample description nTPM
Hippocampus
nTPM: 31.8
1898 Male, age 80, left hemisphere 36.4
1855 Male, age 76, left hemisphere 32.4
2621 Female, age 67, right hemisphere 31.3
2148 Female, age 91, left hemisphere 31.1
1911 Female, age 85, right hemisphere 29.9
2529 Female, age 94, left hemisphere 29.7
Dentate gyrus
nTPM: 32.1
1927 Female, age 91, both hemispheres 35.5
2528 Male, age 74, both hemispheres 32.9
2246 Female, age 85, both hemispheres 32.3
2010 Male, age 76, both hemispheres 32.0
2531 Female, age 67, both hemispheres 30.1
2530 Female, age 94, left hemisphere 29.8
Entorhinal gyrus
nTPM: 33.3
2764 Male, age 80, right hemisphere 35.5
2613 Female, age 94, left hemisphere 34.8
1938 Female, age 85, left hemisphere 34.3
1787 Male, age 76, left hemisphere 34.1
2686 Male, age 75, right hemisphere 30.7
2117 Female, age 91, right hemisphere 30.2
Hippocampus, CA1
nTPM: 33.6
2749 Male, age 80, left hemisphere 42.2
1873 Female, age 85, both hemispheres 33.0
2527 Male, age 74, both hemispheres 31.6
2045 Male, age 76, both hemispheres 30.7
2082 Female, age 91, right hemisphere 30.5
Hippocampus, CA2
nTPM: 33.4
1892 Male, age 76, both hemispheres 37.2
1963 Male, age 80, left hemisphere 36.2
2249 Male, age 74, both hemispheres 33.8
1940 Female, age 85, left hemisphere 31.7
2113 Female, age 91, right hemisphere 31.2
2437 Female, age 94, left hemisphere 30.5
Hippocampus, CA3
nTPM: 33.6
2137 Male, age 80, left hemisphere 40.5
1867 Male, age 76, both hemispheres 34.5
2436 Male, age 74, both hemispheres 33.3
2620 Female, age 94, left hemisphere 32.5
1891 Female, age 85, both hemispheres 31.9
2861 Female, age 67, both hemispheres 28.6
Parahippocampal cortex
nTPM: 32.8
1850 Male, age 80, both hemispheres 36.6
2250 Female, age 67, right hemisphere 35.2
2693 Female, age 94, both hemispheres 34.0
1990 Female, age 91, right hemisphere 33.9
2245 Female, age 91, both hemispheres 33.6
1933 Female, age 85, both hemispheres 33.5
2532 Female, age 72, left hemisphere 32.0
2018 Male, age 76, both hemispheres 30.8
2692 Male, age 74, both hemispheres 29.4
2622 Female, age 67, right hemisphere 29.1
Perirhinal gyrus
nTPM: 36.3
1847 Female, age 91, left hemisphere 39.1
1794 Male, age 80, right hemisphere 37.0
1841 Female, age 85, right hemisphere 35.9
2521 Female, age 94, right hemisphere 35.9
2848 Male, age 76, right hemisphere 33.6
Subiculum
nTPM: 31.6
1977 Female, age 85, both hemispheres 35.1
1901 Male, age 80, both hemispheres 34.4
2619 Male, age 74, both hemispheres 31.4
2042 Male, age 76, both hemispheres 30.1
2729 Female, age 91, right hemisphere 30.1
2438 Female, age 94, left hemisphere 28.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.2
Samples: 197

Max nTPM: 67.5
Min nTPM: 16.5
Std nTPM: 11.3
Median nTPM: 36.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 67.5
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 66.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 64.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 64.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 63.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 61.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 60.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 60.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 60.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 58.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 58.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.0
FF:10169-103B7 60 years, female 30.3
FF:10153-102I9 76 years, female 27.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.9
Samples: 4

Max nTPM: 60.2
Min nTPM: 57.5
Sample A Male 59.0
Sample B Male 57.5
Sample C Female 60.2
Sample D Female 59.0
Hippocampal formation
nTPM: 62.9
Samples: 4

Max nTPM: 65.2
Min nTPM: 59.7
Sample A Male 65.2
Sample B Male 59.7
Sample C Female 65.1
Sample D Female 61.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
70439069 Antisense, RP_050614_03_A08, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.