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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:82.6 nTPM
HPA:82.6 nTPM
GTEx:106.2 nTPM
FANTOM5:63.4 Scaled Tags Per Million
Pig:15.5 nTPM
Mouse:21.5 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053196
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.6
Sample id Sample description nTPM
Hippocampus
nTPM: 80.2
1898 Male, age 80, left hemisphere 85.4
2529 Female, age 94, left hemisphere 81.9
1855 Male, age 76, left hemisphere 79.1
1911 Female, age 85, right hemisphere 79.0
2621 Female, age 67, right hemisphere 78.2
2148 Female, age 91, left hemisphere 77.6
Dentate gyrus
nTPM: 80.1
2010 Male, age 76, both hemispheres 87.0
1927 Female, age 91, both hemispheres 81.2
2528 Male, age 74, both hemispheres 81.1
2246 Female, age 85, both hemispheres 79.3
2530 Female, age 94, left hemisphere 76.2
2531 Female, age 67, both hemispheres 76.0
Entorhinal gyrus
nTPM: 79.3
1938 Female, age 85, left hemisphere 81.6
1787 Male, age 76, left hemisphere 80.0
2117 Female, age 91, right hemisphere 79.8
2764 Male, age 80, right hemisphere 79.7
2613 Female, age 94, left hemisphere 77.3
2686 Male, age 75, right hemisphere 77.2
Hippocampus, CA1
nTPM: 82.6
2749 Male, age 80, left hemisphere 86.8
1873 Female, age 85, both hemispheres 84.0
2045 Male, age 76, both hemispheres 83.0
2527 Male, age 74, both hemispheres 81.5
2082 Female, age 91, right hemisphere 77.5
Hippocampus, CA2
nTPM: 81.2
1892 Male, age 76, both hemispheres 84.6
2249 Male, age 74, both hemispheres 84.2
1963 Male, age 80, left hemisphere 82.1
1940 Female, age 85, left hemisphere 80.2
2113 Female, age 91, right hemisphere 78.1
2437 Female, age 94, left hemisphere 78.1
Hippocampus, CA3
nTPM: 80.3
1867 Male, age 76, both hemispheres 84.9
1891 Female, age 85, both hemispheres 83.6
2436 Male, age 74, both hemispheres 81.5
2137 Male, age 80, left hemisphere 80.6
2620 Female, age 94, left hemisphere 75.9
2861 Female, age 67, both hemispheres 75.4
Parahippocampal cortex
nTPM: 79.2
2018 Male, age 76, both hemispheres 86.3
1933 Female, age 85, both hemispheres 82.6
1850 Male, age 80, both hemispheres 81.1
1990 Female, age 91, right hemisphere 79.6
2250 Female, age 67, right hemisphere 78.5
2532 Female, age 72, left hemisphere 78.3
2693 Female, age 94, both hemispheres 78.2
2692 Male, age 74, both hemispheres 77.4
2245 Female, age 91, both hemispheres 77.3
2622 Female, age 67, right hemisphere 72.6
Perirhinal gyrus
nTPM: 81.2
1794 Male, age 80, right hemisphere 83.5
1847 Female, age 91, left hemisphere 83.3
1841 Female, age 85, right hemisphere 81.7
2521 Female, age 94, right hemisphere 79.2
2848 Male, age 76, right hemisphere 78.2
Subiculum
nTPM: 78.9
2042 Male, age 76, both hemispheres 82.7
1977 Female, age 85, both hemispheres 82.6
1901 Male, age 80, both hemispheres 82.4
2729 Female, age 91, right hemisphere 78.0
2619 Male, age 74, both hemispheres 76.1
2438 Female, age 94, left hemisphere 71.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 106.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 106.2
Samples: 197

Max nTPM: 284.2
Min nTPM: 60.6
Std nTPM: 32.9
Median nTPM: 98.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 284.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 226.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 204.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 197.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 197.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 193.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 187.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 184.6
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 176.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 173.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 166.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.4
FF:10169-103B7 60 years, female 76.3
FF:10153-102I9 76 years, female 50.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 19.6
Min nTPM: 13.0
Sample A Female 19.6
Sample B Female 15.3
Sample C Male 13.0
Sample D Male 14.1
Entorhinal cortex
nTPM: 14.2
Samples: 4

Max nTPM: 19.5
Min nTPM: 10.4
Sample A Female 14.4
Sample B Female 19.5
Sample C Male 12.5
Sample D Male 10.4
Subiculum
nTPM: 14.1
Samples: 4

Max nTPM: 17.3
Min nTPM: 12.2
Sample A Female 17.3
Sample B Female 14.3
Sample C Male 12.5
Sample D Male 12.2
Ventral hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 13.8
Min nTPM: 12.6
Sample A Female 13.8
Sample B Female 12.6
Sample C Male 13.5
Sample D Male 13.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 24.7
Min nTPM: 18.3
Sample A Male 18.8
Sample B Male 18.3
Sample C Female 24.7
Sample D Female 18.7
Hippocampal formation
nTPM: 21.5
Samples: 4

Max nTPM: 27.7
Min nTPM: 18.1
Sample A Male 27.7
Sample B Male 21.4
Sample C Female 18.8
Sample D Female 18.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
76098393 Antisense, RP_060626_01_G06, Mouse strain C57BL/6J (56 days, male) 1.1

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