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PDE6B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:11.2 nTPM
HPA:11.2 nTPM
GTEx:23.6 nTPM
FANTOM5:16.7 Scaled Tags Per Million
Pig:0.1 nTPM
Mouse:0.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054148Antibody HPA059929
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.2
Sample id Sample description nTPM
Hippocampus
nTPM: 7.2
1911 Female, age 85, right hemisphere 14.3
2621 Female, age 67, right hemisphere 9.0
2529 Female, age 94, left hemisphere 7.7
1855 Male, age 76, left hemisphere 6.0
2148 Female, age 91, left hemisphere 5.6
1898 Male, age 80, left hemisphere 0.3
Dentate gyrus
nTPM: 8.5
2246 Female, age 85, both hemispheres 15.0
2530 Female, age 94, left hemisphere 11.3
2531 Female, age 67, both hemispheres 9.4
2010 Male, age 76, both hemispheres 6.3
2528 Male, age 74, both hemispheres 6.2
1927 Female, age 91, both hemispheres 3.0
Entorhinal gyrus
nTPM: 10.0
2764 Male, age 80, right hemisphere 13.3
2686 Male, age 75, right hemisphere 12.5
2613 Female, age 94, left hemisphere 11.7
2117 Female, age 91, right hemisphere 10.7
1787 Male, age 76, left hemisphere 5.9
1938 Female, age 85, left hemisphere 5.8
Hippocampus, CA1
nTPM: 7.7
2082 Female, age 91, right hemisphere 13.7
2527 Male, age 74, both hemispheres 9.7
1873 Female, age 85, both hemispheres 8.3
2045 Male, age 76, both hemispheres 4.9
2749 Male, age 80, left hemisphere 2.0
Hippocampus, CA2
nTPM: 10.0
1940 Female, age 85, left hemisphere 19.6
2249 Male, age 74, both hemispheres 11.3
2437 Female, age 94, left hemisphere 9.7
2113 Female, age 91, right hemisphere 8.9
1963 Male, age 80, left hemisphere 7.6
1892 Male, age 76, both hemispheres 2.7
Hippocampus, CA3
nTPM: 4.7
1891 Female, age 85, both hemispheres 14.0
2861 Female, age 67, both hemispheres 4.4
2436 Male, age 74, both hemispheres 3.5
2620 Female, age 94, left hemisphere 2.8
1867 Male, age 76, both hemispheres 2.4
2137 Male, age 80, left hemisphere 0.7
Parahippocampal cortex
nTPM: 7.8
2692 Male, age 74, both hemispheres 14.9
1990 Female, age 91, right hemisphere 10.6
2532 Female, age 72, left hemisphere 10.0
2693 Female, age 94, both hemispheres 9.3
2622 Female, age 67, right hemisphere 7.4
2018 Male, age 76, both hemispheres 6.1
2245 Female, age 91, both hemispheres 5.9
1850 Male, age 80, both hemispheres 4.9
2250 Female, age 67, right hemisphere 4.4
1933 Female, age 85, both hemispheres 4.3
Perirhinal gyrus
nTPM: 2.5
2848 Male, age 76, right hemisphere 7.7
2521 Female, age 94, right hemisphere 2.2
1841 Female, age 85, right hemisphere 2.0
1794 Male, age 80, right hemisphere 0.8
1847 Female, age 91, left hemisphere 0.0
Subiculum
nTPM: 11.2
1901 Male, age 80, both hemispheres 15.7
2042 Male, age 76, both hemispheres 15.5
2729 Female, age 91, right hemisphere 9.4
2619 Male, age 74, both hemispheres 9.2
2438 Female, age 94, left hemisphere 8.8
1977 Female, age 85, both hemispheres 8.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.6
Samples: 197

Max nTPM: 81.6
Min nTPM: 2.6
Std nTPM: 13.3
Median nTPM: 20.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 81.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 69.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 67.8
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 64.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 59.1
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 56.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 54.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 49.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 49.2
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 47.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 46.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.7
FF:10169-103B7 60 years, female 18.8
FF:10153-102I9 76 years, female 14.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.1
Sample D Male 0.0
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Subiculum
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Ventral hippocampus
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.1
Sample C Male 0.1
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.8
Samples: 4

Max nTPM: 1.7
Min nTPM: 0.0
Sample A Male 1.5
Sample B Male 1.7
Sample C Female 0.0
Sample D Female 0.1
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.3
Sample C Female 0.0
Sample D Female 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.