ABOUTMENU
HELP
NEWS
AGAP3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:120.6 nTPM
HPA:120.6 nTPM
GTEx:245.6 nTPM
FANTOM5:154.2 Scaled Tags Per Million
Pig:54.3 nTPM
Mouse:73.6 nTPM
Allen mouse:5.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012883
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 120.6
Sample id Sample description nTPM
Hippocampus
nTPM: 118.4
2621 Female, age 67, right hemisphere 145.7
1898 Male, age 80, left hemisphere 125.1
2148 Female, age 91, left hemisphere 119.1
1855 Male, age 76, left hemisphere 113.3
2529 Female, age 94, left hemisphere 103.7
1911 Female, age 85, right hemisphere 103.5
Dentate gyrus
nTPM: 113.2
1927 Female, age 91, both hemispheres 133.0
2530 Female, age 94, left hemisphere 131.1
2531 Female, age 67, both hemispheres 119.9
2010 Male, age 76, both hemispheres 105.5
2246 Female, age 85, both hemispheres 97.1
2528 Male, age 74, both hemispheres 92.3
Entorhinal gyrus
nTPM: 120.2
2613 Female, age 94, left hemisphere 170.7
2764 Male, age 80, right hemisphere 127.2
2686 Male, age 75, right hemisphere 114.7
1938 Female, age 85, left hemisphere 112.0
1787 Male, age 76, left hemisphere 111.7
2117 Female, age 91, right hemisphere 84.8
Hippocampus, CA1
nTPM: 116.8
2749 Male, age 80, left hemisphere 179.0
1873 Female, age 85, both hemispheres 113.4
2527 Male, age 74, both hemispheres 111.7
2045 Male, age 76, both hemispheres 92.7
2082 Female, age 91, right hemisphere 87.5
Hippocampus, CA2
nTPM: 113.1
1963 Male, age 80, left hemisphere 152.2
1892 Male, age 76, both hemispheres 129.5
2437 Female, age 94, left hemisphere 112.4
2113 Female, age 91, right hemisphere 100.5
1940 Female, age 85, left hemisphere 92.5
2249 Male, age 74, both hemispheres 91.5
Hippocampus, CA3
nTPM: 120.6
2861 Female, age 67, both hemispheres 170.2
2137 Male, age 80, left hemisphere 155.1
2620 Female, age 94, left hemisphere 126.4
1867 Male, age 76, both hemispheres 106.4
1891 Female, age 85, both hemispheres 83.3
2436 Male, age 74, both hemispheres 82.5
Parahippocampal cortex
nTPM: 113.4
2622 Female, age 67, right hemisphere 143.0
2245 Female, age 91, both hemispheres 141.2
2693 Female, age 94, both hemispheres 118.6
2532 Female, age 72, left hemisphere 110.8
1933 Female, age 85, both hemispheres 107.4
2250 Female, age 67, right hemisphere 105.9
1850 Male, age 80, both hemispheres 105.6
1990 Female, age 91, right hemisphere 103.5
2018 Male, age 76, both hemispheres 101.9
2692 Male, age 74, both hemispheres 95.6
Perirhinal gyrus
nTPM: 117.6
2521 Female, age 94, right hemisphere 130.7
1794 Male, age 80, right hemisphere 124.7
1847 Female, age 91, left hemisphere 123.8
2848 Male, age 76, right hemisphere 104.8
1841 Female, age 85, right hemisphere 104.0
Subiculum
nTPM: 93.9
1901 Male, age 80, both hemispheres 106.1
1977 Female, age 85, both hemispheres 103.0
2619 Male, age 74, both hemispheres 97.5
2042 Male, age 76, both hemispheres 94.5
2438 Female, age 94, left hemisphere 82.3
2729 Female, age 91, right hemisphere 80.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 245.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 245.6
Samples: 197

Max nTPM: 746.5
Min nTPM: 46.6
Std nTPM: 104.2
Median nTPM: 234.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 746.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 526.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 488.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 478.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 474.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 467.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 457.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 453.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 438.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 432.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 426.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 154.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 154.2
FF:10169-103B7 60 years, female 179.9
FF:10153-102I9 76 years, female 128.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 53.9
Samples: 4

Max nTPM: 69.9
Min nTPM: 41.7
Sample A Female 69.9
Sample B Female 58.8
Sample C Male 45.0
Sample D Male 41.7
Entorhinal cortex
nTPM: 48.6
Samples: 4

Max nTPM: 57.3
Min nTPM: 43.7
Sample A Female 48.2
Sample B Female 43.7
Sample C Male 57.3
Sample D Male 45.2
Subiculum
nTPM: 44.4
Samples: 4

Max nTPM: 58.0
Min nTPM: 35.7
Sample A Female 58.0
Sample B Female 39.0
Sample C Male 44.9
Sample D Male 35.7
Ventral hippocampus
nTPM: 54.3
Samples: 4

Max nTPM: 69.4
Min nTPM: 37.3
Sample A Female 47.1
Sample B Female 37.3
Sample C Male 63.4
Sample D Male 69.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.6
Samples: 4

Max nTPM: 70.6
Min nTPM: 63.4
Sample A Male 64.6
Sample B Male 70.6
Sample C Female 63.8
Sample D Female 63.4
Hippocampal formation
nTPM: 73.6
Samples: 4

Max nTPM: 82.0
Min nTPM: 58.8
Sample A Male 58.8
Sample B Male 76.0
Sample C Female 77.7
Sample D Female 82.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.6
2089 Antisense, RP_Baylor_103357, Mouse strain C57BL/6J (56 days, male) 5.6
2090 Antisense, RP_Baylor_103357, Mouse strain C57BL/6J (56 days, male) 3.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.