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TMBIM1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:109.4 nTPM
HPA:109.4 nTPM
GTEx:65.6 nTPM
FANTOM5:134.9 Scaled Tags Per Million
Pig:29.9 nTPM
Mouse:33.0 nTPM
Allen mouse:9.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012093
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 109.4
Sample id Sample description nTPM
Hippocampus
nTPM: 106.6
1855 Male, age 76, left hemisphere 115.2
2529 Female, age 94, left hemisphere 107.7
1911 Female, age 85, right hemisphere 105.3
1898 Male, age 80, left hemisphere 105.1
2148 Female, age 91, left hemisphere 104.0
2621 Female, age 67, right hemisphere 102.1
Dentate gyrus
nTPM: 104.7
2010 Male, age 76, both hemispheres 113.1
2528 Male, age 74, both hemispheres 107.8
2530 Female, age 94, left hemisphere 105.9
2246 Female, age 85, both hemispheres 103.7
2531 Female, age 67, both hemispheres 101.4
1927 Female, age 91, both hemispheres 96.4
Entorhinal gyrus
nTPM: 105.7
2117 Female, age 91, right hemisphere 113.2
2686 Male, age 75, right hemisphere 112.6
1787 Male, age 76, left hemisphere 111.2
2764 Male, age 80, right hemisphere 99.7
1938 Female, age 85, left hemisphere 99.5
2613 Female, age 94, left hemisphere 97.9
Hippocampus, CA1
nTPM: 100.9
2527 Male, age 74, both hemispheres 108.8
2082 Female, age 91, right hemisphere 106.7
2045 Male, age 76, both hemispheres 103.1
1873 Female, age 85, both hemispheres 100.1
2749 Male, age 80, left hemisphere 86.1
Hippocampus, CA2
nTPM: 104.2
2249 Male, age 74, both hemispheres 113.1
2113 Female, age 91, right hemisphere 109.8
2437 Female, age 94, left hemisphere 108.2
1940 Female, age 85, left hemisphere 108.1
1963 Male, age 80, left hemisphere 95.5
1892 Male, age 76, both hemispheres 90.3
Hippocampus, CA3
nTPM: 103.2
2436 Male, age 74, both hemispheres 108.9
1891 Female, age 85, both hemispheres 108.2
2861 Female, age 67, both hemispheres 105.4
1867 Male, age 76, both hemispheres 103.8
2620 Female, age 94, left hemisphere 99.9
2137 Male, age 80, left hemisphere 93.0
Parahippocampal cortex
nTPM: 103.8
2692 Male, age 74, both hemispheres 113.6
2250 Female, age 67, right hemisphere 113.4
2018 Male, age 76, both hemispheres 110.0
2532 Female, age 72, left hemisphere 103.2
2693 Female, age 94, both hemispheres 102.4
2622 Female, age 67, right hemisphere 102.3
1850 Male, age 80, both hemispheres 100.0
1933 Female, age 85, both hemispheres 98.6
1990 Female, age 91, right hemisphere 97.3
2245 Female, age 91, both hemispheres 97.1
Perirhinal gyrus
nTPM: 96.2
1794 Male, age 80, right hemisphere 96.8
2848 Male, age 76, right hemisphere 96.7
2521 Female, age 94, right hemisphere 96.3
1847 Female, age 91, left hemisphere 95.7
1841 Female, age 85, right hemisphere 95.6
Subiculum
nTPM: 109.4
2042 Male, age 76, both hemispheres 116.0
2619 Male, age 74, both hemispheres 115.2
2729 Female, age 91, right hemisphere 114.0
2438 Female, age 94, left hemisphere 108.5
1901 Male, age 80, both hemispheres 105.3
1977 Female, age 85, both hemispheres 97.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.6
Samples: 197

Max nTPM: 278.8
Min nTPM: 22.5
Std nTPM: 33.4
Median nTPM: 56.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 278.8
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 200.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 192.7
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 158.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 153.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 151.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 146.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 143.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 129.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 125.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 123.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 134.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 134.9
FF:10153-102I9 76 years, female 139.1
FF:10169-103B7 60 years, female 130.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.9
Samples: 4

Max nTPM: 41.6
Min nTPM: 17.4
Sample A Female 41.6
Sample B Female 23.6
Sample C Male 36.9
Sample D Male 17.4
Entorhinal cortex
nTPM: 22.5
Samples: 4

Max nTPM: 26.2
Min nTPM: 16.3
Sample A Female 26.2
Sample B Female 23.9
Sample C Male 23.4
Sample D Male 16.3
Subiculum
nTPM: 27.3
Samples: 4

Max nTPM: 32.3
Min nTPM: 23.9
Sample A Female 32.3
Sample B Female 24.4
Sample C Male 23.9
Sample D Male 28.4
Ventral hippocampus
nTPM: 29.6
Samples: 4

Max nTPM: 37.5
Min nTPM: 21.5
Sample A Female 33.0
Sample B Female 21.5
Sample C Male 37.5
Sample D Male 26.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.0
Samples: 4

Max nTPM: 30.9
Min nTPM: 16.8
Sample A Male 30.9
Sample B Male 24.0
Sample C Female 24.1
Sample D Female 16.8
Hippocampal formation
nTPM: 33.0
Samples: 4

Max nTPM: 40.8
Min nTPM: 28.4
Sample A Male 28.4
Sample B Male 31.0
Sample C Female 40.8
Sample D Female 31.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.9
72182992 Antisense, RP_050927_01_G10, Mouse strain C57BL/6J (56 days, male) 9.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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