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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:49.3 nTPM
HPA:49.3 nTPM
GTEx:162.7 nTPM
FANTOM5:105.8 Scaled Tags Per Million
Pig:48.7 nTPM
Mouse:106.8 nTPM
Allen mouse:21.4 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 49.3
Sample id Sample description nTPM
Amygdala
nTPM: 45.6
2517 Female, age 94, left hemisphere 45.9
2695 Female, age 67, right hemisphere 45.8
1987 Female, age 91, left hemisphere 45.5
2514 Male, age 75, right hemisphere 45.5
2814 Male, age 76, right hemisphere 45.1
Basal amygdala
nTPM: 47.2
2243 Female, age 91, right hemisphere 54.5
2110 Male, age 80, left hemisphere 46.5
2685 Female, age 94, left hemisphere 46.1
2827 Female, age 67, right hemisphere 45.7
2609 Male, age 75, right hemisphere 45.5
1955 Male, age 76, both hemispheres 45.2
Central amygdala
nTPM: 47.5
2239 Male, age 80, left hemisphere 55.0
2826 Female, age 94, left hemisphere 46.3
2515 Male, age 75, right hemisphere 45.7
2701 Female, age 91, right hemisphere 45.3
1905 Male, age 76, both hemispheres 45.1
Corticomedial amygdala
nTPM: 49.3
2240 Male, age 76, both hemispheres 56.2
2242 Female, age 91, right hemisphere 53.5
2429 Female, age 94, left hemisphere 48.6
2428 Male, age 75, right hemisphere 46.4
2535 Female, age 67, right hemisphere 45.7
2829 Male, age 80, left hemisphere 45.4
Lateral amygdala
nTPM: 45.5
2534 Female, age 94, left hemisphere 46.0
2830 Female, age 67, right hemisphere 45.8
2516 Male, age 75, right hemisphere 45.4
2255 Female, age 91, right hemisphere 45.3
2256 Male, age 80, left hemisphere 45.2
1883 Male, age 76, both hemispheres 45.1
Stria terminalis, bed nucleus
nTPM: 47.1
2201 Male, age 74, unknown 47.2
1974 Female, age 91, both hemispheres 47.1
2486 Female, age 94, both hemispheres 46.8

AMYGDALA - GTEx RNA-seqi
Average nTPM 162.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 162.7
Samples: 152

Max nTPM: 278.6
Min nTPM: 87.4
Std nTPM: 32.7
Median nTPM: 156.8
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 278.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 261.2
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 251.4
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 238.0
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 234.9
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 233.1
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 226.0
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 224.6
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 219.7
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 219.0
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 213.8
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 105.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 105.8
FF:10151-102I7 76 years, female 105.8

AMYGDALA - Pig RNA-seqi
Average nTPM 48.7
Pig sample Sample description nTPM
Amygdala
nTPM: 48.7
Samples: 4

Max nTPM: 65.7
Min nTPM: 40.8
Sample A Female 65.7
Sample B Female 40.8
Sample C Male 43.1
Sample D Male 45.2

AMYGDALA - Mouse RNA-seqi
Average nTPM 106.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 106.8
Samples: 4

Max nTPM: 118.2
Min nTPM: 97.3
Sample A Male 112.1
Sample B Male 118.2
Sample C Female 99.5
Sample D Female 97.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 21.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 21.4
72735 Antisense, RP_040407_01_B07, Mouse strain C57BL/6J (56 days, male) 25.3
67752111 Antisense, RP_040922_01_C04, Mouse strain C57BL/6J (56 days, male) 17.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.