ABOUTMENU
HELP
NEWS
MTCH1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:326.1 nTPM
HPA:326.1 nTPM
GTEx:240.1 nTPM
FANTOM5:133.9 Scaled Tags Per Million
Pig:217.4 nTPM
Mouse:496.4 nTPM
Allen mouse:24.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015971
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 326.1
Sample id Sample description nTPM
Hippocampus
nTPM: 280.9
1898 Male, age 80, left hemisphere 337.9
2529 Female, age 94, left hemisphere 276.8
1855 Male, age 76, left hemisphere 274.9
2621 Female, age 67, right hemisphere 272.1
2148 Female, age 91, left hemisphere 265.9
1911 Female, age 85, right hemisphere 257.8
Dentate gyrus
nTPM: 283.7
1927 Female, age 91, both hemispheres 305.9
2010 Male, age 76, both hemispheres 302.2
2530 Female, age 94, left hemisphere 290.1
2528 Male, age 74, both hemispheres 272.3
2246 Female, age 85, both hemispheres 267.1
2531 Female, age 67, both hemispheres 264.8
Entorhinal gyrus
nTPM: 301.5
2764 Male, age 80, right hemisphere 352.1
1938 Female, age 85, left hemisphere 318.7
1787 Male, age 76, left hemisphere 302.8
2613 Female, age 94, left hemisphere 297.8
2686 Male, age 75, right hemisphere 272.1
2117 Female, age 91, right hemisphere 265.6
Hippocampus, CA1
nTPM: 305.4
2749 Male, age 80, left hemisphere 410.1
1873 Female, age 85, both hemispheres 298.9
2045 Male, age 76, both hemispheres 285.2
2527 Male, age 74, both hemispheres 269.3
2082 Female, age 91, right hemisphere 263.5
Hippocampus, CA2
nTPM: 294.0
1963 Male, age 80, left hemisphere 351.1
1892 Male, age 76, both hemispheres 330.4
2437 Female, age 94, left hemisphere 276.7
1940 Female, age 85, left hemisphere 272.5
2249 Male, age 74, both hemispheres 270.6
2113 Female, age 91, right hemisphere 262.7
Hippocampus, CA3
nTPM: 292.2
2137 Male, age 80, left hemisphere 338.7
1867 Male, age 76, both hemispheres 300.0
2620 Female, age 94, left hemisphere 298.4
1891 Female, age 85, both hemispheres 277.3
2436 Male, age 74, both hemispheres 272.2
2861 Female, age 67, both hemispheres 266.8
Parahippocampal cortex
nTPM: 284.7
1850 Male, age 80, both hemispheres 346.3
1933 Female, age 85, both hemispheres 305.1
1990 Female, age 91, right hemisphere 297.9
2532 Female, age 72, left hemisphere 285.4
2018 Male, age 76, both hemispheres 279.5
2250 Female, age 67, right hemisphere 271.5
2693 Female, age 94, both hemispheres 271.3
2692 Male, age 74, both hemispheres 268.3
2245 Female, age 91, both hemispheres 266.3
2622 Female, age 67, right hemisphere 255.6
Perirhinal gyrus
nTPM: 326.1
1794 Male, age 80, right hemisphere 362.3
1847 Female, age 91, left hemisphere 355.6
1841 Female, age 85, right hemisphere 318.4
2848 Male, age 76, right hemisphere 305.7
2521 Female, age 94, right hemisphere 288.6
Subiculum
nTPM: 278.2
1901 Male, age 80, both hemispheres 315.3
1977 Female, age 85, both hemispheres 306.2
2042 Male, age 76, both hemispheres 270.2
2619 Male, age 74, both hemispheres 267.3
2438 Female, age 94, left hemisphere 257.4
2729 Female, age 91, right hemisphere 252.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 240.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 240.1
Samples: 197

Max nTPM: 450.1
Min nTPM: 127.4
Std nTPM: 68.7
Median nTPM: 226.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 450.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 418.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 417.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 397.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 385.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 384.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 384.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 379.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 367.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 365.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 365.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 133.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 133.9
FF:10169-103B7 60 years, female 181.0
FF:10153-102I9 76 years, female 86.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 217.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 217.4
Samples: 4

Max nTPM: 308.4
Min nTPM: 141.3
Sample A Female 308.4
Sample B Female 248.2
Sample C Male 171.8
Sample D Male 141.3
Entorhinal cortex
nTPM: 169.2
Samples: 4

Max nTPM: 193.9
Min nTPM: 146.4
Sample A Female 193.9
Sample B Female 156.7
Sample C Male 179.6
Sample D Male 146.4
Subiculum
nTPM: 166.8
Samples: 4

Max nTPM: 205.4
Min nTPM: 144.1
Sample A Female 205.4
Sample B Female 155.1
Sample C Male 162.7
Sample D Male 144.1
Ventral hippocampus
nTPM: 199.5
Samples: 4

Max nTPM: 233.0
Min nTPM: 126.1
Sample A Female 217.9
Sample B Female 126.1
Sample C Male 220.9
Sample D Male 233.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 496.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 423.0
Samples: 4

Max nTPM: 486.5
Min nTPM: 364.3
Sample A Male 364.3
Sample B Male 400.3
Sample C Female 441.0
Sample D Female 486.5
Hippocampal formation
nTPM: 496.4
Samples: 4

Max nTPM: 530.8
Min nTPM: 461.1
Sample A Male 496.1
Sample B Male 461.1
Sample C Female 530.8
Sample D Female 497.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 24.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.2
67764936 Antisense, RP_040916_02_F04, Mouse strain C57BL/6J (56 days, male) 24.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.