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MTCH1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:310.3 nTPM
HPA:310.3 nTPM
GTEx:239.3 nTPM
FANTOM5:158.8 Scaled Tags Per Million
Pig:169.1 nTPM
Mouse:431.6 nTPM
Allen mouse:15.9 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 310.3
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 296.3
2586 Male, age 75, left hemisphere 351.6
2411 Female, age 72, unknown 320.7
2666 Male, age 74, left hemisphere 311.8
1827 Male, age 72, unknown 311.0
1870 Female, age 42, unknown 302.6
2828 Female, age 72, unknown 285.7
1833 Male, age 53, unknown 280.6
2019 Male, age 18, unknown 273.0
1830 Male, age 51, unknown 272.1
2219 Male, age 76, both hemispheres 253.6
Dorsal raphe nucleus
nTPM: 300.3
2298 Female, age 72, unknown 331.8
2047 Male, age 72, unknown 313.5
2750 Male, age 76, both hemispheres 295.4
1828 Male, age 53, unknown 290.1
2016 Female, age 72, unknown 270.5
Inferior colliculus
nTPM: 273.7
2097 Female, age 72, unknown 282.5
2849 Male, age 72, unknown 276.4
1848 Female, age 42, unknown 269.8
1890 Male, age 53, unknown 265.9
Median raphe nucleus
nTPM: 303.7
2220 Male, age 76, midline 303.7
Pedunculopontine tegmental nucleus
nTPM: 286.1
1921 Female, age 85, both hemispheres 306.8
2334 Male, age 80, both hemispheres 300.4
2338 Male, age 61, both hemispheres 251.1
Periaquaductal grey, anterior
nTPM: 310.3
1947 Male, age 18, unknown 322.7
1795 Male, age 51, unknown 313.1
2502 Female, age 75, unknown 295.1
Periaquaductal grey, dorsal
nTPM: 277.3
1840 Male, age 53, unknown 308.7
2464 Female, age 72, unknown 270.6
2850 Male, age 76, both hemispheres 268.7
1831 Male, age 72, unknown 261.3
Periaquaductal grey, lateral
nTPM: 266.3
2053 Male, age 18, unknown 282.6
2140 Male, age 76, both hemispheres 270.7
2272 Male, age 74, both hemispheres 245.5
Pretectal area
nTPM: 290.8
2667 Female, age 75, unknown 322.3
1816 Male, age 51, unknown 310.4
2007 Male, age 72, unknown 305.8
2825 Male, age 18, unknown 299.0
2224 Female, age 72, unknown 297.3
1817 Female, age 42, unknown 292.6
1944 Female, age 72, unknown 289.4
1815 Male, age 53, unknown 284.2
2407 Male, age 75, both hemispheres 275.3
2316 Male, age 76, right hemisphere 263.6
2273 Male, age 74, both hemispheres 259.2
Red nucleus
nTPM: 272.7
2584 Male, age 75, left hemisphere 303.0
1821 Female, age 72, unknown 294.6
2588 Male, age 74, left hemisphere 280.8
2769 Male, age 72, unknown 274.6
2227 Male, age 72, unknown 274.1
1904 Male, age 53, unknown 269.1
2503 Female, age 72, unknown 269.1
2725 Female, age 75, unknown 268.4
2785 Male, age 18, unknown 267.3
1954 Female, age 42, unknown 267.1
1865 Male, age 51, unknown 255.4
2823 Male, age 76, right hemisphere 249.5
Substantia nigra
nTPM: 293.4
1916 Female, age 42, unknown 310.9
1851 Male, age 51, unknown 309.9
2583 Male, age 75, right hemisphere 307.8
2665 Male, age 74, both hemispheres 299.7
1889 Female, age 72, unknown 298.7
2241 Male, age 72, unknown 295.7
1941 Male, age 53, unknown 291.4
2409 Female, age 72, unknown 279.6
2590 Female, age 75, unknown 274.4
2699 Male, age 18, unknown 265.6
Superior colliculus
nTPM: 283.2
2664 Male, age 75, both hemispheres 314.6
1796 Male, age 53, unknown 301.9
2261 Male, age 18, unknown 298.9
2668 Female, age 75, unknown 289.1
1839 Male, age 51, unknown 285.8
2087 Female, age 72, unknown 278.3
1895 Male, age 76, right hemisphere 272.8
2587 Male, age 74, left hemisphere 271.2
1913 Female, age 42, unknown 269.7
1995 Male, age 72, unknown 250.2
Ventral tegmental area
nTPM: 294.9
2410 Female, age 72, unknown 313.4
1915 Female, age 42, unknown 307.9
1942 Male, age 51, unknown 295.5
2223 Female, age 72, unknown 292.0
2021 Male, age 53, unknown 283.2
2218 Male, age 76, both hemispheres 277.5

MIDBRAIN - GTEx RNA-seqi
Average nTPM 239.3
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 239.3
Samples: 139

Max nTPM: 404.4
Min nTPM: 146.5
Std nTPM: 51.5
Median nTPM: 230.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 404.4
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 379.7
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 363.0
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 361.4
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 360.9
GTEX-WHSE-0011-R2A-SM-3P5ZL 20-29 years, male 352.7
GTEX-N7MS-0011-R2a-SM-2HML6 60-69 years, male 333.1
GTEX-1HB9E-0011-R2b-SM-A96RW 50-59 years, male 329.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 324.2
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 323.8
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 323.4
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 158.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 158.8
FF:10158-103A5 76 years, female 158.8

MIDBRAIN - Pig RNA-seqi
Average nTPM 169.1
Pig sample Sample description nTPM
Midbrain
nTPM: 165.8
Samples: 4

Max nTPM: 202.6
Min nTPM: 136.4
Sample A Female 162.0
Sample B Female 136.4
Sample C Male 202.6
Sample D Male 162.3
Periaqueductal gray
nTPM: 136.7
Samples: 3

Max nTPM: 165.6
Min nTPM: 119.0
Sample B Female 125.4
Sample C Male 165.6
Sample D Male 119.0
Substantia nigra
nTPM: 169.1
Samples: 4

Max nTPM: 244.7
Min nTPM: 91.0
Sample A Female 244.7
Sample B Female 135.5
Sample C Male 205.2
Sample D Male 91.0
Superior colliculi
nTPM: 165.5
Samples: 4

Max nTPM: 202.8
Min nTPM: 147.2
Sample A Female 202.8
Sample B Female 154.6
Sample C Male 157.3
Sample D Male 147.2

MIDBRAIN - Mouse RNA-seqi
Average nTPM 431.6
Mouse sample Sample description nTPM
Midbrain
nTPM: 431.6
Samples: 4

Max nTPM: 442.4
Min nTPM: 419.1
Sample A Male 436.0
Sample B Male 429.0
Sample C Female 419.1
Sample D Female 442.4

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 15.9
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 15.9
67764936 Antisense, RP_040916_02_F04, Mouse strain C57BL/6J (56 days, male) 15.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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