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NDUFAF1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.0 nTPM
HPA:21.0 nTPM
GTEx:23.4 nTPM
FANTOM5:16.1 Scaled Tags Per Million
Pig:25.9 nTPM
Mouse:32.5 nTPM
Allen mouse:0.1 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 21.0
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 19.8
2019 Male, age 18, unknown 21.6
1827 Male, age 72, unknown 21.2
1870 Female, age 42, unknown 20.5
1830 Male, age 51, unknown 19.7
2411 Female, age 72, unknown 19.7
1833 Male, age 53, unknown 19.5
2666 Male, age 74, left hemisphere 19.5
2828 Female, age 72, unknown 19.1
2219 Male, age 76, both hemispheres 18.7
2586 Male, age 75, left hemisphere 18.3
Dorsal raphe nucleus
nTPM: 19.7
2298 Female, age 72, unknown 20.5
2750 Male, age 76, both hemispheres 20.3
1828 Male, age 53, unknown 19.6
2016 Female, age 72, unknown 19.2
2047 Male, age 72, unknown 19.2
Inferior colliculus
nTPM: 19.8
2097 Female, age 72, unknown 21.5
1890 Male, age 53, unknown 19.6
1848 Female, age 42, unknown 19.5
2849 Male, age 72, unknown 18.4
Median raphe nucleus
nTPM: 20.2
2220 Male, age 76, midline 20.2
Pedunculopontine tegmental nucleus
nTPM: 20.2
1921 Female, age 85, both hemispheres 20.3
2338 Male, age 61, both hemispheres 20.2
2334 Male, age 80, both hemispheres 20.1
Periaquaductal grey, anterior
nTPM: 19.7
1947 Male, age 18, unknown 20.0
2502 Female, age 75, unknown 19.8
1795 Male, age 51, unknown 19.4
Periaquaductal grey, dorsal
nTPM: 19.3
2464 Female, age 72, unknown 20.0
1840 Male, age 53, unknown 19.7
2850 Male, age 76, both hemispheres 19.0
1831 Male, age 72, unknown 18.6
Periaquaductal grey, lateral
nTPM: 19.4
2272 Male, age 74, both hemispheres 20.0
2053 Male, age 18, unknown 19.7
2140 Male, age 76, both hemispheres 18.6
Pretectal area
nTPM: 20.4
1816 Male, age 51, unknown 21.5
2007 Male, age 72, unknown 21.5
1944 Female, age 72, unknown 21.2
1817 Female, age 42, unknown 21.0
1815 Male, age 53, unknown 20.7
2667 Female, age 75, unknown 20.3
2224 Female, age 72, unknown 20.1
2273 Male, age 74, both hemispheres 19.9
2316 Male, age 76, right hemisphere 19.7
2825 Male, age 18, unknown 19.2
2407 Male, age 75, both hemispheres 18.9
Red nucleus
nTPM: 19.9
1821 Female, age 72, unknown 20.9
2785 Male, age 18, unknown 20.7
2823 Male, age 76, right hemisphere 20.7
2725 Female, age 75, unknown 20.4
1954 Female, age 42, unknown 20.2
1865 Male, age 51, unknown 19.9
1904 Male, age 53, unknown 19.7
2584 Male, age 75, left hemisphere 19.6
2588 Male, age 74, left hemisphere 19.4
2769 Male, age 72, unknown 19.4
2227 Male, age 72, unknown 19.3
2503 Female, age 72, unknown 19.1
Substantia nigra
nTPM: 21.0
2409 Female, age 72, unknown 23.7
2241 Male, age 72, unknown 23.3
1889 Female, age 72, unknown 21.7
2590 Female, age 75, unknown 20.9
1851 Male, age 51, unknown 20.8
1916 Female, age 42, unknown 20.6
1941 Male, age 53, unknown 20.5
2665 Male, age 74, both hemispheres 20.0
2583 Male, age 75, right hemisphere 19.5
2699 Male, age 18, unknown 19.1
Superior colliculus
nTPM: 19.7
1895 Male, age 76, right hemisphere 21.1
2087 Female, age 72, unknown 20.4
1796 Male, age 53, unknown 20.1
1913 Female, age 42, unknown 19.9
1839 Male, age 51, unknown 19.7
2261 Male, age 18, unknown 19.6
2587 Male, age 74, left hemisphere 19.6
1995 Male, age 72, unknown 19.4
2668 Female, age 75, unknown 19.2
2664 Male, age 75, both hemispheres 18.2
Ventral tegmental area
nTPM: 19.5
1915 Female, age 42, unknown 20.3
2218 Male, age 76, both hemispheres 20.1
2410 Female, age 72, unknown 20.1
2021 Male, age 53, unknown 19.1
1942 Male, age 51, unknown 18.9
2223 Female, age 72, unknown 18.8

MIDBRAIN - GTEx RNA-seqi
Average nTPM 23.4
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 23.4
Samples: 139

Max nTPM: 38.5
Min nTPM: 14.9
Std nTPM: 4.0
Median nTPM: 22.5
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 38.5
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 34.2
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 34.0
GTEX-QMR6-0011-R2A-SM-32PKV 50-59 years, male 32.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 31.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 31.1
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 30.8
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 29.9
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 29.7
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 29.6
GTEX-1H3O1-0011-R2b-SM-CKZOT 60-69 years, male 29.5
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 16.1
FF:10158-103A5 76 years, female 16.1

MIDBRAIN - Pig RNA-seqi
Average nTPM 25.9
Pig sample Sample description nTPM
Midbrain
nTPM: 25.9
Samples: 4

Max nTPM: 34.1
Min nTPM: 21.3
Sample A Female 34.1
Sample B Female 25.7
Sample C Male 21.3
Sample D Male 22.3
Periaqueductal gray
nTPM: 23.2
Samples: 3

Max nTPM: 23.5
Min nTPM: 23.0
Sample B Female 23.5
Sample C Male 23.2
Sample D Male 23.0
Substantia nigra
nTPM: 24.1
Samples: 4

Max nTPM: 25.5
Min nTPM: 21.7
Sample A Female 24.8
Sample B Female 21.7
Sample C Male 24.4
Sample D Male 25.5
Superior colliculi
nTPM: 21.7
Samples: 4

Max nTPM: 23.2
Min nTPM: 18.2
Sample A Female 23.2
Sample B Female 18.2
Sample C Male 22.8
Sample D Male 22.5

MIDBRAIN - Mouse RNA-seqi
Average nTPM 32.5
Mouse sample Sample description nTPM
Midbrain
nTPM: 32.5
Samples: 4

Max nTPM: 32.8
Min nTPM: 32.3
Sample A Male 32.5
Sample B Male 32.5
Sample C Female 32.3
Sample D Female 32.8

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.1
583861 Antisense, RP_040831_01_B12, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.