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METTL5
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:42.5 nTPM
HPA:42.5 nTPM
GTEx:39.0 nTPM
FANTOM5:45.3 Scaled Tags Per Million
Pig:18.1 nTPM
Mouse:11.8 nTPM
Allen mouse:0.2 Expression energy

CAUDATE - Antibody stainingi
Antibody HPA038223
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 42.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 40.1
2481 Female, age 94, left hemisphere 42.0
2288 Male, age 75, left hemisphere 41.7
1857 Female, age 85, left hemisphere 40.2
2846 Female, age 79, unknown 40.1
1854 Male, age 80, left hemisphere 39.9
2290 Female, age 72, unknown 39.3
1781 Male, age 74, unknown 39.0
2289 Male, age 61, right hemisphere 38.7
Claustrum
nTPM: 38.9
2392 Female, age 94, both hemispheres 42.5
2198 Male, age 80, both hemispheres 41.1
2196 Female, age 79, unknown 39.7
2284 Female, age 91, both hemispheres 38.6
2292 Female, age 85, both hemispheres 38.5
2568 Male, age 61, both hemispheres 38.5
1956 Male, age 74, unknown 37.6
2491 Male, age 75, both hemispheres 37.6
2645 Female, age 72, unknown 36.4
Globus pallidus, externus
nTPM: 38.3
1996 Male, age 80, right hemisphere 40.5
2772 Female, age 79, unknown 40.0
2395 Male, age 75, both hemispheres 39.6
2646 Male, age 61, right hemisphere 36.0
2567 Female, age 72, unknown 35.6
Globus pallidus, internus
nTPM: 40.2
2287 Male, age 75, right hemisphere 43.5
2037 Male, age 80, right hemisphere 41.5
2778 Female, age 91, both hemispheres 41.5
2483 Female, age 94, right hemisphere 41.0
1818 Male, age 74, unknown 40.1
2111 Female, age 85, right hemisphere 38.3
2566 Female, age 72, unknown 35.6
Nucleus accumbens
nTPM: 41.6
2391 Female, age 94, left hemisphere 45.2
1856 Female, age 91, right hemisphere 42.2
2698 Female, age 72, unknown 42.2
2286 Male, age 75, left hemisphere 41.8
1783 Male, age 74, unknown 40.6
2824 Male, age 61, right hemisphere 40.5
1806 Female, age 85, left hemisphere 40.4
2732 Male, age 80, right hemisphere 39.7
Nucleus basalis of Meynert
nTPM: 38.3
2393 Male, age 80, right hemisphere 40.6
2484 Female, age 94, left hemisphere 38.9
2569 Male, age 61, both hemispheres 37.0
2821 Male, age 75, both hemispheres 36.7
Nucleus of the diagonal band
nTPM: 42.0
2195 Female, age 85, both hemispheres 44.5
1812 Female, age 91, both hemispheres 42.8
2775 Male, age 80, right hemisphere 42.4
1979 Male, age 74, unknown 41.0
2029 Male, age 61, right hemisphere 39.1
Olfactory tubercle
nTPM: 42.5
1846 Male, age 80, right hemisphere 46.1
2487 Female, age 94, left hemisphere 41.7
1998 Female, age 91, both hemispheres 41.5
2856 Male, age 75, right hemisphere 40.7
Putamen
nTPM: 39.7
2466 Female, age 79, unknown 41.6
1937 Female, age 91, right hemisphere 41.0
1838 Male, age 80, right hemisphere 40.7
2482 Female, age 94, left hemisphere 40.4
1829 Male, age 74, unknown 40.3
2647 Male, age 75, left hemisphere 37.6
2489 Female, age 72, unknown 36.6
Septal nuclei
nTPM: 41.4
2031 Female, age 72, unknown 45.5
2009 Female, age 91, both hemispheres 42.9
1960 Male, age 74, unknown 42.7
2059 Female, age 85, both hemispheres 41.0
2394 Male, age 61, left hemisphere 40.3
2629 Female, age 94, right hemisphere 40.1
2199 Male, age 80, right hemisphere 37.6

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 39.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 36.5
Samples: 246

Max nTPM: 71.4
Min nTPM: 23.8
Std nTPM: 7.9
Median nTPM: 34.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 71.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 68.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 67.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 64.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 64.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 63.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 61.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 60.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 59.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 56.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 55.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 39.0
Samples: 246

Max nTPM: 86.4
Min nTPM: 23.6
Std nTPM: 7.9
Median nTPM: 37.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 86.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 77.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 76.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 60.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 57.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 56.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 54.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 54.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 53.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 52.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 52.5
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Brain - Putamen (basal ganglia)
Average nTPM: 38.3
Samples: 205

Max nTPM: 87.2
Min nTPM: 23.3
Std nTPM: 7.9
Median nTPM: 36.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 87.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 63.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 57.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 55.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 54.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 54.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 54.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 52.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 52.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 52.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 52.1
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 39.3
FF:10164-103B2 76 years, female 39.3
Globus pallidus
Scaled Tags Per Million: 37.8
FF:10161-103A8 76 years, female 40.1
FF:10175-103C4 60 years, female 35.5
Nucleus accumbens
Scaled Tags Per Million: 33.9
FF:10037-101F1 23-56 years, mixed 33.9
Putamen
Scaled Tags Per Million: 45.3
FF:10176-103C5 60 years, female 45.3

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 18.1
Pig sample Sample description nTPM
Caudate
nTPM: 14.3
Samples: 4

Max nTPM: 15.5
Min nTPM: 12.7
Sample A Female 15.5
Sample B Female 13.7
Sample C Male 15.1
Sample D Male 12.7
Putamen
nTPM: 16.3
Samples: 4

Max nTPM: 20.4
Min nTPM: 13.5
Sample A Female 20.4
Sample B Female 13.5
Sample C Male 16.0
Sample D Male 15.1
Septum
nTPM: 18.1
Samples: 4

Max nTPM: 20.6
Min nTPM: 15.8
Sample A Female 18.4
Sample B Female 15.8
Sample C Male 17.6
Sample D Male 20.6
Ventral pallidum
nTPM: 14.7
Samples: 4

Max nTPM: 15.9
Min nTPM: 12.9
Sample A Female 14.5
Sample B Female 15.9
Sample C Male 12.9
Sample D Male 15.3

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 11.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 7.3
Samples: 4

Max nTPM: 8.1
Min nTPM: 5.3
Sample A Male 8.1
Sample B Male 5.3
Sample C Female 8.0
Sample D Female 7.9
Septum
nTPM: 11.8
Samples: 4

Max nTPM: 12.4
Min nTPM: 10.8
Sample A Male 12.4
Sample B Male 11.9
Sample C Female 11.9
Sample D Female 10.8
Ventral forebrain
nTPM: 10.2
Samples: 4

Max nTPM: 10.7
Min nTPM: 9.9
Sample A Male 9.9
Sample B Male 10.3
Sample C Female 10.0
Sample D Female 10.7

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.2
74821968 Antisense, RP_060321_02_F06, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 0.2
74821968 Antisense, RP_060321_02_F06, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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