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METTL5
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:42.5 nTPM
HPA:42.5 nTPM
GTEx:43.9 nTPM
FANTOM5:36.0 Scaled Tags Per Million
Pig:18.3 nTPM
Mouse:13.4 nTPM
Allen mouse:0.3 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 42.5
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 38.8
1870 Female, age 42, unknown 42.0
1833 Male, age 53, unknown 41.1
1830 Male, age 51, unknown 40.7
2411 Female, age 72, unknown 40.7
1827 Male, age 72, unknown 40.6
2828 Female, age 72, unknown 39.3
2586 Male, age 75, left hemisphere 37.0
2219 Male, age 76, both hemispheres 36.6
2019 Male, age 18, unknown 35.6
2666 Male, age 74, left hemisphere 34.8
Dorsal raphe nucleus
nTPM: 40.9
2298 Female, age 72, unknown 43.4
2047 Male, age 72, unknown 41.2
2750 Male, age 76, both hemispheres 41.1
2016 Female, age 72, unknown 40.5
1828 Male, age 53, unknown 38.4
Inferior colliculus
nTPM: 39.4
2097 Female, age 72, unknown 41.2
2849 Male, age 72, unknown 38.9
1848 Female, age 42, unknown 38.7
1890 Male, age 53, unknown 38.7
Median raphe nucleus
nTPM: 38.6
2220 Male, age 76, midline 38.6
Pedunculopontine tegmental nucleus
nTPM: 40.4
2338 Male, age 61, both hemispheres 41.6
1921 Female, age 85, both hemispheres 40.0
2334 Male, age 80, both hemispheres 39.6
Periaquaductal grey, anterior
nTPM: 40.4
1947 Male, age 18, unknown 43.5
1795 Male, age 51, unknown 39.8
2502 Female, age 75, unknown 37.9
Periaquaductal grey, dorsal
nTPM: 38.9
1840 Male, age 53, unknown 40.1
2850 Male, age 76, both hemispheres 40.1
1831 Male, age 72, unknown 38.3
2464 Female, age 72, unknown 37.1
Periaquaductal grey, lateral
nTPM: 42.5
2272 Male, age 74, both hemispheres 44.1
2053 Male, age 18, unknown 44.0
2140 Male, age 76, both hemispheres 39.5
Pretectal area
nTPM: 39.7
2224 Female, age 72, unknown 43.6
2273 Male, age 74, both hemispheres 41.8
2825 Male, age 18, unknown 41.4
1815 Male, age 53, unknown 40.0
1816 Male, age 51, unknown 39.6
1817 Female, age 42, unknown 39.4
2007 Male, age 72, unknown 39.2
2407 Male, age 75, both hemispheres 38.7
1944 Female, age 72, unknown 38.1
2316 Male, age 76, right hemisphere 37.9
2667 Female, age 75, unknown 37.5
Red nucleus
nTPM: 38.8
2725 Female, age 75, unknown 43.3
2503 Female, age 72, unknown 41.7
1821 Female, age 72, unknown 39.5
2823 Male, age 76, right hemisphere 39.5
2588 Male, age 74, left hemisphere 38.8
2769 Male, age 72, unknown 38.6
1954 Female, age 42, unknown 38.2
1865 Male, age 51, unknown 37.5
2785 Male, age 18, unknown 37.4
2227 Male, age 72, unknown 37.3
2584 Male, age 75, left hemisphere 37.2
1904 Male, age 53, unknown 37.0
Substantia nigra
nTPM: 38.3
1851 Male, age 51, unknown 40.1
1941 Male, age 53, unknown 39.2
2241 Male, age 72, unknown 38.8
2590 Female, age 75, unknown 38.8
1889 Female, age 72, unknown 38.7
2699 Male, age 18, unknown 38.3
1916 Female, age 42, unknown 38.0
2583 Male, age 75, right hemisphere 37.6
2665 Male, age 74, both hemispheres 37.1
2409 Female, age 72, unknown 36.6
Superior colliculus
nTPM: 39.1
1895 Male, age 76, right hemisphere 40.5
2087 Female, age 72, unknown 40.1
2587 Male, age 74, left hemisphere 40.0
1913 Female, age 42, unknown 39.8
1995 Male, age 72, unknown 39.5
1796 Male, age 53, unknown 39.0
2668 Female, age 75, unknown 39.0
2261 Male, age 18, unknown 38.5
1839 Male, age 51, unknown 38.3
2664 Male, age 75, both hemispheres 36.4
Ventral tegmental area
nTPM: 39.3
2410 Female, age 72, unknown 40.6
2223 Female, age 72, unknown 40.0
2218 Male, age 76, both hemispheres 39.9
2021 Male, age 53, unknown 39.3
1915 Female, age 42, unknown 38.2
1942 Male, age 51, unknown 38.0

MIDBRAIN - GTEx RNA-seqi
Average nTPM 43.9
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 43.9
Samples: 139

Max nTPM: 92.3
Min nTPM: 28.0
Std nTPM: 10.8
Median nTPM: 40.5
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 92.3
GTEX-1F75B-0011-R2a-SM-ARL8I 50-59 years, male 89.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 85.6
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 76.0
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 69.7
GTEX-ZV68-0011-R2a-SM-4YCDK 50-59 years, female 66.0
GTEX-12WSA-0011-R2a-SM-57WDK 60-69 years, male 61.8
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 60.5
GTEX-YJ89-0011-R2b-SM-4RGLT 60-69 years, male 60.4
GTEX-1GN1U-0011-R2a-SM-CL53A 50-59 years, female 57.5
GTEX-12WSH-0011-R2a-SM-5GU68 50-59 years, male 57.4
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 36.0
FF:10158-103A5 76 years, female 36.0

MIDBRAIN - Pig RNA-seqi
Average nTPM 18.3
Pig sample Sample description nTPM
Midbrain
nTPM: 18.3
Samples: 4

Max nTPM: 22.7
Min nTPM: 14.1
Sample A Female 22.7
Sample B Female 21.1
Sample C Male 14.1
Sample D Male 15.4
Periaqueductal gray
nTPM: 17.5
Samples: 3

Max nTPM: 18.3
Min nTPM: 15.9
Sample B Female 15.9
Sample C Male 18.2
Sample D Male 18.3
Substantia nigra
nTPM: 17.6
Samples: 4

Max nTPM: 22.2
Min nTPM: 15.3
Sample A Female 22.2
Sample B Female 15.7
Sample C Male 15.3
Sample D Male 17.1
Superior colliculi
nTPM: 16.4
Samples: 4

Max nTPM: 19.1
Min nTPM: 14.7
Sample A Female 19.1
Sample B Female 14.7
Sample C Male 15.6
Sample D Male 16.3

MIDBRAIN - Mouse RNA-seqi
Average nTPM 13.4
Mouse sample Sample description nTPM
Midbrain
nTPM: 13.5
Samples: 4

Max nTPM: 15.1
Min nTPM: 11.0
Sample A Male 11.0
Sample B Male 13.9
Sample C Female 13.8
Sample D Female 15.1

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.3
74821968 Antisense, RP_060321_02_F06, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas project is funded
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