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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:45.5 nTPM
HPA:45.5 nTPM
GTEx:48.4 nTPM
FANTOM5:100.4 Scaled Tags Per Million
Pig:25.3 nTPM
Mouse:7.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039989
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.5
Sample id Sample description nTPM
Hippocampus
nTPM: 45.5
2529 Female, age 94, left hemisphere 49.1
1898 Male, age 80, left hemisphere 47.0
1911 Female, age 85, right hemisphere 45.6
2621 Female, age 67, right hemisphere 44.1
1855 Male, age 76, left hemisphere 43.7
2148 Female, age 91, left hemisphere 43.2
Dentate gyrus
nTPM: 45.1
2530 Female, age 94, left hemisphere 51.3
2010 Male, age 76, both hemispheres 48.7
2528 Male, age 74, both hemispheres 44.7
2531 Female, age 67, both hemispheres 43.8
2246 Female, age 85, both hemispheres 42.7
1927 Female, age 91, both hemispheres 39.5
Entorhinal gyrus
nTPM: 43.9
2686 Male, age 75, right hemisphere 49.7
2117 Female, age 91, right hemisphere 47.5
1938 Female, age 85, left hemisphere 42.5
2764 Male, age 80, right hemisphere 42.0
1787 Male, age 76, left hemisphere 41.9
2613 Female, age 94, left hemisphere 39.6
Hippocampus, CA1
nTPM: 42.1
2082 Female, age 91, right hemisphere 44.6
2527 Male, age 74, both hemispheres 43.3
1873 Female, age 85, both hemispheres 43.2
2045 Male, age 76, both hemispheres 40.5
2749 Male, age 80, left hemisphere 39.0
Hippocampus, CA2
nTPM: 44.4
1940 Female, age 85, left hemisphere 47.0
2113 Female, age 91, right hemisphere 46.2
2249 Male, age 74, both hemispheres 45.8
1963 Male, age 80, left hemisphere 43.6
2437 Female, age 94, left hemisphere 43.3
1892 Male, age 76, both hemispheres 40.7
Hippocampus, CA3
nTPM: 41.6
2861 Female, age 67, both hemispheres 44.4
1867 Male, age 76, both hemispheres 43.5
1891 Female, age 85, both hemispheres 43.5
2436 Male, age 74, both hemispheres 40.3
2137 Male, age 80, left hemisphere 39.4
2620 Female, age 94, left hemisphere 38.7
Parahippocampal cortex
nTPM: 42.3
2018 Male, age 76, both hemispheres 44.6
2692 Male, age 74, both hemispheres 44.1
2245 Female, age 91, both hemispheres 43.5
2532 Female, age 72, left hemisphere 43.4
1933 Female, age 85, both hemispheres 42.4
2622 Female, age 67, right hemisphere 41.8
1990 Female, age 91, right hemisphere 41.5
1850 Male, age 80, both hemispheres 40.9
2250 Female, age 67, right hemisphere 40.9
2693 Female, age 94, both hemispheres 40.0
Perirhinal gyrus
nTPM: 39.3
1794 Male, age 80, right hemisphere 40.6
2848 Male, age 76, right hemisphere 40.0
1841 Female, age 85, right hemisphere 38.8
2521 Female, age 94, right hemisphere 38.8
1847 Female, age 91, left hemisphere 38.2
Subiculum
nTPM: 44.5
2042 Male, age 76, both hemispheres 50.5
1901 Male, age 80, both hemispheres 45.0
2729 Female, age 91, right hemisphere 44.7
2438 Female, age 94, left hemisphere 43.0
1977 Female, age 85, both hemispheres 42.3
2619 Male, age 74, both hemispheres 41.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.4
Samples: 197

Max nTPM: 161.9
Min nTPM: 18.2
Std nTPM: 22.8
Median nTPM: 41.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 161.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 123.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 117.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 115.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 107.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 106.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 105.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 102.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 100.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 96.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 95.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.4
FF:10153-102I9 76 years, female 112.0
FF:10169-103B7 60 years, female 88.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 20.4
Min nTPM: 15.3
Sample A Female 16.5
Sample B Female 15.3
Sample C Male 20.4
Sample D Male 15.8
Entorhinal cortex
nTPM: 22.5
Samples: 4

Max nTPM: 24.6
Min nTPM: 19.3
Sample A Female 23.9
Sample B Female 22.2
Sample C Male 24.6
Sample D Male 19.3
Subiculum
nTPM: 25.3
Samples: 4

Max nTPM: 27.8
Min nTPM: 21.3
Sample A Female 27.4
Sample B Female 21.3
Sample C Male 24.8
Sample D Male 27.8
Ventral hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 25.3
Min nTPM: 17.8
Sample A Female 21.1
Sample B Female 21.1
Sample C Male 25.3
Sample D Male 17.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.5
Samples: 4

Max nTPM: 8.9
Min nTPM: 5.8
Sample A Male 8.9
Sample B Male 7.8
Sample C Female 7.4
Sample D Female 5.8
Hippocampal formation
nTPM: 6.0
Samples: 4

Max nTPM: 9.7
Min nTPM: 4.5
Sample A Male 5.2
Sample B Male 4.5
Sample C Female 4.7
Sample D Female 9.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.