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MBNL2
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:46.6 nTPM
HPA:46.6 nTPM
GTEx:37.0 nTPM
FANTOM5:421.6 Scaled Tags Per Million
Pig:89.2 nTPM
Mouse:61.0 nTPM
Allen mouse:9.0 Expression energy

MIDBRAIN - Annotated protein expression
Pending normal tissue analysis

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 46.6
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 37.5
1870 Female, age 42, unknown 50.3
1830 Male, age 51, unknown 47.3
2019 Male, age 18, unknown 47.2
1833 Male, age 53, unknown 41.4
2411 Female, age 72, unknown 38.5
2586 Male, age 75, left hemisphere 32.2
2666 Male, age 74, left hemisphere 31.6
2828 Female, age 72, unknown 31.0
2219 Male, age 76, both hemispheres 29.5
1827 Male, age 72, unknown 25.9
Dorsal raphe nucleus
nTPM: 28.5
2750 Male, age 76, both hemispheres 39.5
1828 Male, age 53, unknown 31.5
2016 Female, age 72, unknown 30.7
2047 Male, age 72, unknown 23.6
2298 Female, age 72, unknown 17.5
Inferior colliculus
nTPM: 30.4
1848 Female, age 42, unknown 33.7
1890 Male, age 53, unknown 31.6
2097 Female, age 72, unknown 29.7
2849 Male, age 72, unknown 26.5
Median raphe nucleus
nTPM: 24.8
2220 Male, age 76, midline 24.8
Pedunculopontine tegmental nucleus
nTPM: 30.5
2334 Male, age 80, both hemispheres 31.7
2338 Male, age 61, both hemispheres 30.1
1921 Female, age 85, both hemispheres 29.7
Periaquaductal grey, anterior
nTPM: 28.4
2502 Female, age 75, unknown 34.5
1947 Male, age 18, unknown 30.7
1795 Male, age 51, unknown 19.8
Periaquaductal grey, dorsal
nTPM: 23.1
2464 Female, age 72, unknown 28.9
1831 Male, age 72, unknown 24.5
2850 Male, age 76, both hemispheres 21.3
1840 Male, age 53, unknown 17.8
Periaquaductal grey, lateral
nTPM: 24.4
2272 Male, age 74, both hemispheres 30.7
2053 Male, age 18, unknown 24.9
2140 Male, age 76, both hemispheres 17.4
Pretectal area
nTPM: 30.0
1817 Female, age 42, unknown 35.1
2407 Male, age 75, both hemispheres 35.1
2667 Female, age 75, unknown 34.7
1815 Male, age 53, unknown 33.4
2007 Male, age 72, unknown 31.6
2273 Male, age 74, both hemispheres 30.1
2316 Male, age 76, right hemisphere 27.9
1944 Female, age 72, unknown 27.4
2825 Male, age 18, unknown 25.8
1816 Male, age 51, unknown 25.4
2224 Female, age 72, unknown 23.7
Red nucleus
nTPM: 46.6
1821 Female, age 72, unknown 58.4
1865 Male, age 51, unknown 57.1
1954 Female, age 42, unknown 53.0
1904 Male, age 53, unknown 52.9
2227 Male, age 72, unknown 49.9
2785 Male, age 18, unknown 49.8
2769 Male, age 72, unknown 49.2
2503 Female, age 72, unknown 42.8
2823 Male, age 76, right hemisphere 41.1
2584 Male, age 75, left hemisphere 38.9
2588 Male, age 74, left hemisphere 35.4
2725 Female, age 75, unknown 30.7
Substantia nigra
nTPM: 30.8
2583 Male, age 75, right hemisphere 42.2
1889 Female, age 72, unknown 36.4
1941 Male, age 53, unknown 35.5
2409 Female, age 72, unknown 31.5
2241 Male, age 72, unknown 30.9
2699 Male, age 18, unknown 30.9
1851 Male, age 51, unknown 30.4
2590 Female, age 75, unknown 28.7
1916 Female, age 42, unknown 25.0
2665 Male, age 74, both hemispheres 16.5
Superior colliculus
nTPM: 34.0
1913 Female, age 42, unknown 47.2
1995 Male, age 72, unknown 45.4
1895 Male, age 76, right hemisphere 36.6
2668 Female, age 75, unknown 36.6
2587 Male, age 74, left hemisphere 35.7
1839 Male, age 51, unknown 33.0
2664 Male, age 75, both hemispheres 29.7
2087 Female, age 72, unknown 28.0
1796 Male, age 53, unknown 25.2
2261 Male, age 18, unknown 22.7
Ventral tegmental area
nTPM: 32.5
2223 Female, age 72, unknown 48.2
2410 Female, age 72, unknown 37.4
1942 Male, age 51, unknown 30.9
1915 Female, age 42, unknown 26.5
2218 Male, age 76, both hemispheres 26.5
2021 Male, age 53, unknown 25.3

MIDBRAIN - GTEx RNA-seqi
Average nTPM 37.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 37.0
Samples: 139

Max nTPM: 95.8
Min nTPM: 15.8
Std nTPM: 14.4
Median nTPM: 33.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 95.8
GTEX-ZAB4-0011-R2a-SM-4RGNP 40-49 years, male 83.7
GTEX-N7MT-0011-R2a-SM-2I3GI 60-69 years, female 82.0
GTEX-NPJ7-0011-R2a-SM-2I3GF 60-69 years, female 79.3
GTEX-Q2AG-0011-R2A-SM-2HMIT 40-49 years, female 76.4
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 67.5
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 67.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 65.3
GTEX-11ZTS-0011-R2b-SM-5BC75 60-69 years, female 64.6
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 63.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X 60-69 years, male 61.1
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 421.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 421.6
FF:10158-103A5 76 years, female 421.6

MIDBRAIN - Pig RNA-seqi
Average nTPM 89.2
Pig sample Sample description nTPM
Midbrain
nTPM: 89.3
Samples: 4

Max nTPM: 122.6
Min nTPM: 68.1
Sample A Female 122.6
Sample B Female 68.1
Sample C Male 92.3
Sample D Male 74.0
Periaqueductal gray
nTPM: 55.0
Samples: 3

Max nTPM: 58.0
Min nTPM: 50.8
Sample B Female 58.0
Sample C Male 50.8
Sample D Male 56.2
Substantia nigra
nTPM: 68.4
Samples: 4

Max nTPM: 86.9
Min nTPM: 52.0
Sample A Female 72.1
Sample B Female 52.0
Sample C Male 62.7
Sample D Male 86.9
Superior colliculi
nTPM: 83.3
Samples: 4

Max nTPM: 95.1
Min nTPM: 64.3
Sample A Female 85.7
Sample B Female 64.3
Sample C Male 95.1
Sample D Male 88.1

MIDBRAIN - Mouse RNA-seqi
Average nTPM 61.0
Mouse sample Sample description nTPM
Midbrain
nTPM: 61.1
Samples: 4

Max nTPM: 65.2
Min nTPM: 54.9
Sample A Male 54.9
Sample B Male 62.2
Sample C Female 65.2
Sample D Female 61.9

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 9.0
71022744 Antisense, RP_050719_01_E04, Mouse strain C57BL/6J (56 days, male) 9.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.