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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:19.9 nTPM
HPA:19.9 nTPM
GTEx:22.1 nTPM
FANTOM5:25.7 Scaled Tags Per Million
Pig:9.8 nTPM
Mouse:12.0 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024406
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.9
Sample id Sample description nTPM
Hippocampus
nTPM: 15.3
1898 Male, age 80, left hemisphere 18.4
2621 Female, age 67, right hemisphere 17.0
1855 Male, age 76, left hemisphere 15.0
1911 Female, age 85, right hemisphere 14.1
2148 Female, age 91, left hemisphere 13.9
2529 Female, age 94, left hemisphere 13.4
Dentate gyrus
nTPM: 15.7
2530 Female, age 94, left hemisphere 17.9
1927 Female, age 91, both hemispheres 16.9
2531 Female, age 67, both hemispheres 15.6
2010 Male, age 76, both hemispheres 14.9
2528 Male, age 74, both hemispheres 14.6
2246 Female, age 85, both hemispheres 14.1
Entorhinal gyrus
nTPM: 19.2
2613 Female, age 94, left hemisphere 25.8
2764 Male, age 80, right hemisphere 21.1
1938 Female, age 85, left hemisphere 19.6
1787 Male, age 76, left hemisphere 17.8
2117 Female, age 91, right hemisphere 15.9
2686 Male, age 75, right hemisphere 14.9
Hippocampus, CA1
nTPM: 16.7
2749 Male, age 80, left hemisphere 21.6
2527 Male, age 74, both hemispheres 16.3
1873 Female, age 85, both hemispheres 16.0
2045 Male, age 76, both hemispheres 15.2
2082 Female, age 91, right hemisphere 14.7
Hippocampus, CA2
nTPM: 16.3
1963 Male, age 80, left hemisphere 18.5
1892 Male, age 76, both hemispheres 18.0
1940 Female, age 85, left hemisphere 16.1
2437 Female, age 94, left hemisphere 15.2
2249 Male, age 74, both hemispheres 15.1
2113 Female, age 91, right hemisphere 14.6
Hippocampus, CA3
nTPM: 17.1
2137 Male, age 80, left hemisphere 21.0
2620 Female, age 94, left hemisphere 19.5
2861 Female, age 67, both hemispheres 17.3
2436 Male, age 74, both hemispheres 16.0
1867 Male, age 76, both hemispheres 15.1
1891 Female, age 85, both hemispheres 13.9
Parahippocampal cortex
nTPM: 17.3
1850 Male, age 80, both hemispheres 18.8
2532 Female, age 72, left hemisphere 18.6
1990 Female, age 91, right hemisphere 17.9
1933 Female, age 85, both hemispheres 17.8
2245 Female, age 91, both hemispheres 17.8
2693 Female, age 94, both hemispheres 17.3
2622 Female, age 67, right hemisphere 16.4
2018 Male, age 76, both hemispheres 16.2
2692 Male, age 74, both hemispheres 16.2
2250 Female, age 67, right hemisphere 15.6
Perirhinal gyrus
nTPM: 19.9
1847 Female, age 91, left hemisphere 22.1
1794 Male, age 80, right hemisphere 20.6
1841 Female, age 85, right hemisphere 19.4
2521 Female, age 94, right hemisphere 18.9
2848 Male, age 76, right hemisphere 18.6
Subiculum
nTPM: 15.2
2438 Female, age 94, left hemisphere 17.6
1977 Female, age 85, both hemispheres 17.3
2619 Male, age 74, both hemispheres 14.8
1901 Male, age 80, both hemispheres 14.7
2042 Male, age 76, both hemispheres 13.6
2729 Female, age 91, right hemisphere 13.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.1
Samples: 197

Max nTPM: 44.3
Min nTPM: 4.7
Std nTPM: 7.5
Median nTPM: 20.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 44.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 44.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 42.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 42.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 41.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 40.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 39.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 38.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 36.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 36.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 36.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.7
FF:10169-103B7 60 years, female 29.2
FF:10153-102I9 76 years, female 22.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 12.3
Min nTPM: 6.8
Sample A Female 12.3
Sample B Female 8.5
Sample C Male 11.5
Sample D Male 6.8
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 9.6
Min nTPM: 7.0
Sample A Female 9.6
Sample B Female 7.0
Sample C Male 9.0
Sample D Male 7.6
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 10.8
Min nTPM: 7.3
Sample A Female 10.8
Sample B Female 8.0
Sample C Male 9.9
Sample D Male 7.3
Ventral hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 13.5
Min nTPM: 6.5
Sample A Female 9.9
Sample B Female 6.5
Sample C Male 13.5
Sample D Male 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 13.7
Min nTPM: 11.3
Sample A Male 11.6
Sample B Male 11.3
Sample C Female 11.5
Sample D Female 13.7
Hippocampal formation
nTPM: 11.4
Samples: 4

Max nTPM: 11.8
Min nTPM: 10.4
Sample A Male 10.4
Sample B Male 11.7
Sample C Female 11.8
Sample D Female 11.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
70445616 Antisense, RP_050614_04_C01, Mouse strain C57BL/6J (56 days, male) 1.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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