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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:32.9 nTPM
HPA:32.9 nTPM
GTEx:31.2 nTPM
FANTOM5:17.8 Scaled Tags Per Million
Pig:4.5 nTPM
Mouse:7.8 nTPM
Allen mouse:4.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB009208
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.9
Sample id Sample description nTPM
Hippocampus
nTPM: 31.5
1898 Male, age 80, left hemisphere 34.4
2529 Female, age 94, left hemisphere 33.8
2148 Female, age 91, left hemisphere 31.6
1855 Male, age 76, left hemisphere 30.5
2621 Female, age 67, right hemisphere 29.7
1911 Female, age 85, right hemisphere 28.8
Dentate gyrus
nTPM: 31.5
2530 Female, age 94, left hemisphere 33.9
2010 Male, age 76, both hemispheres 33.6
2528 Male, age 74, both hemispheres 32.2
2246 Female, age 85, both hemispheres 30.3
1927 Female, age 91, both hemispheres 29.7
2531 Female, age 67, both hemispheres 29.3
Entorhinal gyrus
nTPM: 32.9
2764 Male, age 80, right hemisphere 35.6
2117 Female, age 91, right hemisphere 34.8
2686 Male, age 75, right hemisphere 33.9
1938 Female, age 85, left hemisphere 31.9
2613 Female, age 94, left hemisphere 31.3
1787 Male, age 76, left hemisphere 30.1
Hippocampus, CA1
nTPM: 31.4
2527 Male, age 74, both hemispheres 32.2
2082 Female, age 91, right hemisphere 32.1
2749 Male, age 80, left hemisphere 31.9
2045 Male, age 76, both hemispheres 31.5
1873 Female, age 85, both hemispheres 29.3
Hippocampus, CA2
nTPM: 31.7
1963 Male, age 80, left hemisphere 34.0
2249 Male, age 74, both hemispheres 33.3
2113 Female, age 91, right hemisphere 31.6
2437 Female, age 94, left hemisphere 31.4
1940 Female, age 85, left hemisphere 30.6
1892 Male, age 76, both hemispheres 29.3
Hippocampus, CA3
nTPM: 31.6
2620 Female, age 94, left hemisphere 35.7
2436 Male, age 74, both hemispheres 33.5
2861 Female, age 67, both hemispheres 31.0
1891 Female, age 85, both hemispheres 30.2
2137 Male, age 80, left hemisphere 29.7
1867 Male, age 76, both hemispheres 29.6
Parahippocampal cortex
nTPM: 31.8
1990 Female, age 91, right hemisphere 35.2
2692 Male, age 74, both hemispheres 34.4
2622 Female, age 67, right hemisphere 33.6
2018 Male, age 76, both hemispheres 32.6
2532 Female, age 72, left hemisphere 31.4
2245 Female, age 91, both hemispheres 30.8
1850 Male, age 80, both hemispheres 30.4
1933 Female, age 85, both hemispheres 30.2
2693 Female, age 94, both hemispheres 30.1
2250 Female, age 67, right hemisphere 29.5
Perirhinal gyrus
nTPM: 29.6
1794 Male, age 80, right hemisphere 31.3
1847 Female, age 91, left hemisphere 29.8
2848 Male, age 76, right hemisphere 29.2
1841 Female, age 85, right hemisphere 28.9
2521 Female, age 94, right hemisphere 28.7
Subiculum
nTPM: 32.5
1977 Female, age 85, both hemispheres 33.5
2438 Female, age 94, left hemisphere 32.8
1901 Male, age 80, both hemispheres 32.6
2619 Male, age 74, both hemispheres 32.5
2729 Female, age 91, right hemisphere 32.5
2042 Male, age 76, both hemispheres 31.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.2
Samples: 197

Max nTPM: 95.0
Min nTPM: 13.1
Std nTPM: 11.8
Median nTPM: 28.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 95.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 76.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 72.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 69.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 68.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 66.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 58.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 58.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 57.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 54.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 53.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.8
FF:10153-102I9 76 years, female 23.0
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.7
Samples: 4

Max nTPM: 4.9
Min nTPM: 2.6
Sample A Female 4.9
Sample B Female 3.5
Sample C Male 3.8
Sample D Male 2.6
Entorhinal cortex
nTPM: 4.1
Samples: 4

Max nTPM: 4.7
Min nTPM: 3.1
Sample A Female 3.9
Sample B Female 4.7
Sample C Male 4.5
Sample D Male 3.1
Subiculum
nTPM: 4.4
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.6
Sample A Female 4.8
Sample B Female 4.3
Sample C Male 4.9
Sample D Male 3.6
Ventral hippocampus
nTPM: 4.6
Samples: 4

Max nTPM: 6.0
Min nTPM: 3.3
Sample A Female 5.3
Sample B Female 3.7
Sample C Male 6.0
Sample D Male 3.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.8
Samples: 4

Max nTPM: 8.3
Min nTPM: 6.9
Sample A Male 8.2
Sample B Male 8.3
Sample C Female 6.9
Sample D Female 7.8
Hippocampal formation
nTPM: 7.3
Samples: 4

Max nTPM: 7.9
Min nTPM: 6.9
Sample A Male 7.4
Sample B Male 6.9
Sample C Female 7.9
Sample D Female 6.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.3
67767468 Antisense, RP_040916_02_B08, Mouse strain C57BL/6J (56 days, male) 8.5
68845251 Antisense, RP_050224_01_D08, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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