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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:57.5 nTPM
HPA:57.5 nTPM
GTEx:64.9 nTPM
FANTOM5:22.1 Scaled Tags Per Million
Pig:25.2 nTPM
Mouse:33.7 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041745
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.5
Sample id Sample description nTPM
Hippocampus
nTPM: 51.5
2148 Female, age 91, left hemisphere 55.7
2621 Female, age 67, right hemisphere 55.0
2529 Female, age 94, left hemisphere 51.6
1855 Male, age 76, left hemisphere 49.2
1911 Female, age 85, right hemisphere 49.0
1898 Male, age 80, left hemisphere 48.2
Dentate gyrus
nTPM: 54.6
2531 Female, age 67, both hemispheres 57.0
1927 Female, age 91, both hemispheres 56.6
2530 Female, age 94, left hemisphere 54.8
2528 Male, age 74, both hemispheres 53.7
2246 Female, age 85, both hemispheres 53.5
2010 Male, age 76, both hemispheres 52.1
Entorhinal gyrus
nTPM: 57.5
2613 Female, age 94, left hemisphere 67.8
2764 Male, age 80, right hemisphere 61.6
2686 Male, age 75, right hemisphere 57.9
1787 Male, age 76, left hemisphere 56.9
1938 Female, age 85, left hemisphere 52.9
2117 Female, age 91, right hemisphere 48.0
Hippocampus, CA1
nTPM: 52.2
2749 Male, age 80, left hemisphere 54.6
2082 Female, age 91, right hemisphere 54.0
1873 Female, age 85, both hemispheres 52.9
2527 Male, age 74, both hemispheres 52.3
2045 Male, age 76, both hemispheres 47.1
Hippocampus, CA2
nTPM: 52.9
2437 Female, age 94, left hemisphere 55.3
1963 Male, age 80, left hemisphere 54.6
1940 Female, age 85, left hemisphere 52.9
2113 Female, age 91, right hemisphere 52.5
1892 Male, age 76, both hemispheres 52.3
2249 Male, age 74, both hemispheres 50.0
Hippocampus, CA3
nTPM: 53.2
2620 Female, age 94, left hemisphere 63.2
2861 Female, age 67, both hemispheres 58.8
1867 Male, age 76, both hemispheres 51.4
1891 Female, age 85, both hemispheres 49.8
2137 Male, age 80, left hemisphere 49.3
2436 Male, age 74, both hemispheres 46.6
Parahippocampal cortex
nTPM: 56.2
2622 Female, age 67, right hemisphere 64.0
2693 Female, age 94, both hemispheres 61.7
2692 Male, age 74, both hemispheres 60.6
1990 Female, age 91, right hemisphere 58.6
2532 Female, age 72, left hemisphere 56.0
1933 Female, age 85, both hemispheres 54.3
1850 Male, age 80, both hemispheres 52.3
2018 Male, age 76, both hemispheres 51.6
2245 Female, age 91, both hemispheres 51.6
2250 Female, age 67, right hemisphere 51.6
Perirhinal gyrus
nTPM: 54.5
1794 Male, age 80, right hemisphere 57.9
2521 Female, age 94, right hemisphere 57.1
1847 Female, age 91, left hemisphere 54.4
1841 Female, age 85, right hemisphere 53.6
2848 Male, age 76, right hemisphere 49.7
Subiculum
nTPM: 49.8
2619 Male, age 74, both hemispheres 56.4
2729 Female, age 91, right hemisphere 54.2
1977 Female, age 85, both hemispheres 49.8
1901 Male, age 80, both hemispheres 47.8
2042 Male, age 76, both hemispheres 46.3
2438 Female, age 94, left hemisphere 44.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 64.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.9
Samples: 197

Max nTPM: 112.1
Min nTPM: 38.5
Std nTPM: 13.5
Median nTPM: 62.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 112.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 100.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 98.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 97.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 96.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 94.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 93.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 93.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 93.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 90.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 90.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.1
FF:10169-103B7 60 years, female 23.0
FF:10153-102I9 76 years, female 21.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.1
Samples: 4

Max nTPM: 23.4
Min nTPM: 15.3
Sample A Female 22.8
Sample B Female 23.4
Sample C Male 18.8
Sample D Male 15.3
Entorhinal cortex
nTPM: 24.5
Samples: 4

Max nTPM: 29.7
Min nTPM: 20.2
Sample A Female 24.7
Sample B Female 23.3
Sample C Male 29.7
Sample D Male 20.2
Subiculum
nTPM: 25.2
Samples: 4

Max nTPM: 31.1
Min nTPM: 19.2
Sample A Female 31.1
Sample B Female 25.5
Sample C Male 25.1
Sample D Male 19.2
Ventral hippocampus
nTPM: 22.7
Samples: 4

Max nTPM: 29.1
Min nTPM: 19.6
Sample A Female 21.6
Sample B Female 20.4
Sample C Male 29.1
Sample D Male 19.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.4
Samples: 4

Max nTPM: 36.3
Min nTPM: 29.9
Sample A Male 29.9
Sample B Male 32.1
Sample C Female 36.3
Sample D Female 35.2
Hippocampal formation
nTPM: 33.7
Samples: 4

Max nTPM: 38.4
Min nTPM: 28.5
Sample A Male 29.7
Sample B Male 28.5
Sample C Female 38.4
Sample D Female 38.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
69095968 Antisense, RP_050324_02_F05, Mouse strain C57BL/6J (56 days, male) 9.5

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The Human Protein Atlas

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