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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:456.2 nTPM
HPA:456.2 nTPM
GTEx:507.1 nTPM
FANTOM5:756.0 Scaled Tags Per Million
Pig:430.8 nTPM
Mouse:994.3 nTPM
Allen mouse:19.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001462Antibody CAB000157
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 456.2
Sample id Sample description nTPM
Hippocampus
nTPM: 359.7
1898 Male, age 80, left hemisphere 424.9
2621 Female, age 67, right hemisphere 395.2
1855 Male, age 76, left hemisphere 375.5
2529 Female, age 94, left hemisphere 330.4
1911 Female, age 85, right hemisphere 328.4
2148 Female, age 91, left hemisphere 304.0
Dentate gyrus
nTPM: 375.6
2530 Female, age 94, left hemisphere 448.0
2010 Male, age 76, both hemispheres 409.1
2246 Female, age 85, both hemispheres 379.7
1927 Female, age 91, both hemispheres 360.4
2531 Female, age 67, both hemispheres 349.1
2528 Male, age 74, both hemispheres 307.5
Entorhinal gyrus
nTPM: 406.9
2764 Male, age 80, right hemisphere 468.0
2613 Female, age 94, left hemisphere 428.1
1938 Female, age 85, left hemisphere 425.0
1787 Male, age 76, left hemisphere 408.6
2117 Female, age 91, right hemisphere 374.1
2686 Male, age 75, right hemisphere 337.7
Hippocampus, CA1
nTPM: 403.9
2749 Male, age 80, left hemisphere 512.5
2045 Male, age 76, both hemispheres 389.6
1873 Female, age 85, both hemispheres 388.7
2082 Female, age 91, right hemisphere 371.9
2527 Male, age 74, both hemispheres 356.7
Hippocampus, CA2
nTPM: 383.6
1892 Male, age 76, both hemispheres 430.1
1963 Male, age 80, left hemisphere 416.7
1940 Female, age 85, left hemisphere 390.0
2437 Female, age 94, left hemisphere 364.6
2249 Male, age 74, both hemispheres 363.6
2113 Female, age 91, right hemisphere 336.4
Hippocampus, CA3
nTPM: 356.9
2137 Male, age 80, left hemisphere 424.6
1867 Male, age 76, both hemispheres 373.3
2620 Female, age 94, left hemisphere 366.3
1891 Female, age 85, both hemispheres 360.0
2436 Male, age 74, both hemispheres 341.0
2861 Female, age 67, both hemispheres 276.3
Parahippocampal cortex
nTPM: 385.2
1850 Male, age 80, both hemispheres 452.8
2532 Female, age 72, left hemisphere 444.7
2245 Female, age 91, both hemispheres 418.6
1933 Female, age 85, both hemispheres 416.9
1990 Female, age 91, right hemisphere 412.9
2250 Female, age 67, right hemisphere 389.5
2018 Male, age 76, both hemispheres 385.4
2693 Female, age 94, both hemispheres 331.3
2692 Male, age 74, both hemispheres 316.2
2622 Female, age 67, right hemisphere 283.5
Perirhinal gyrus
nTPM: 456.2
1847 Female, age 91, left hemisphere 483.0
1794 Male, age 80, right hemisphere 480.5
1841 Female, age 85, right hemisphere 459.7
2521 Female, age 94, right hemisphere 429.4
2848 Male, age 76, right hemisphere 428.7
Subiculum
nTPM: 366.1
1977 Female, age 85, both hemispheres 442.8
1901 Male, age 80, both hemispheres 413.4
2438 Female, age 94, left hemisphere 361.9
2042 Male, age 76, both hemispheres 350.7
2619 Male, age 74, both hemispheres 336.6
2729 Female, age 91, right hemisphere 291.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 507.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 507.1
Samples: 197

Max nTPM: 863.0
Min nTPM: 171.1
Std nTPM: 120.8
Median nTPM: 495.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 863.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 808.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 770.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 762.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 739.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 731.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 726.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 725.5
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 720.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 712.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 709.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 756.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 756.0
FF:10169-103B7 60 years, female 884.1
FF:10153-102I9 76 years, female 627.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 430.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 378.7
Samples: 4

Max nTPM: 495.6
Min nTPM: 250.9
Sample A Female 495.6
Sample B Female 395.0
Sample C Male 373.1
Sample D Male 250.9
Entorhinal cortex
nTPM: 430.8
Samples: 4

Max nTPM: 460.2
Min nTPM: 398.8
Sample A Female 460.2
Sample B Female 452.1
Sample C Male 411.9
Sample D Male 398.8
Subiculum
nTPM: 342.1
Samples: 4

Max nTPM: 443.2
Min nTPM: 293.8
Sample A Female 443.2
Sample B Female 293.8
Sample C Male 322.7
Sample D Male 308.5
Ventral hippocampus
nTPM: 354.9
Samples: 4

Max nTPM: 415.6
Min nTPM: 226.3
Sample A Female 402.9
Sample B Female 226.3
Sample C Male 415.6
Sample D Male 374.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 994.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 959.5
Samples: 4

Max nTPM: 1064.1
Min nTPM: 874.1
Sample A Male 940.9
Sample B Male 958.7
Sample C Female 874.1
Sample D Female 1064.1
Hippocampal formation
nTPM: 994.4
Samples: 4

Max nTPM: 1155.1
Min nTPM: 851.8
Sample A Male 851.8
Sample B Male 1006.6
Sample C Female 1155.1
Sample D Female 963.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.0
79591705 Antisense, RP_071218_02_B09, Mouse strain C57BL/6J (56 days, male) 32.1
106 Antisense, RP_Baylor_253875, Mouse strain C57BL/6J (56 days, male) 24.7
107 Antisense, RP_Baylor_253875, Mouse strain C57BL/6J (56 days, male) 22.1
70611467 Antisense, RP_050630_03_C12, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.