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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:31.9 nTPM
HPA:31.9 nTPM
GTEx:44.6 nTPM
FANTOM5:37.3 Scaled Tags Per Million
Pig:9.3 nTPM
Mouse:40.2 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043464
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.9
Sample id Sample description nTPM
Hippocampus
nTPM: 31.4
1898 Male, age 80, left hemisphere 32.9
2529 Female, age 94, left hemisphere 32.6
1911 Female, age 85, right hemisphere 31.7
2621 Female, age 67, right hemisphere 31.6
1855 Male, age 76, left hemisphere 30.7
2148 Female, age 91, left hemisphere 29.3
Dentate gyrus
nTPM: 31.1
2530 Female, age 94, left hemisphere 32.6
2531 Female, age 67, both hemispheres 31.3
2010 Male, age 76, both hemispheres 31.2
2528 Male, age 74, both hemispheres 30.7
1927 Female, age 91, both hemispheres 30.5
2246 Female, age 85, both hemispheres 30.4
Entorhinal gyrus
nTPM: 31.9
2764 Male, age 80, right hemisphere 34.4
2613 Female, age 94, left hemisphere 32.9
1938 Female, age 85, left hemisphere 32.4
2117 Female, age 91, right hemisphere 31.6
1787 Male, age 76, left hemisphere 30.8
2686 Male, age 75, right hemisphere 29.5
Hippocampus, CA1
nTPM: 31.2
2749 Male, age 80, left hemisphere 34.8
2527 Male, age 74, both hemispheres 31.2
1873 Female, age 85, both hemispheres 30.1
2045 Male, age 76, both hemispheres 30.0
2082 Female, age 91, right hemisphere 30.0
Hippocampus, CA2
nTPM: 31.7
1963 Male, age 80, left hemisphere 33.2
1940 Female, age 85, left hemisphere 32.4
1892 Male, age 76, both hemispheres 31.8
2437 Female, age 94, left hemisphere 31.4
2249 Male, age 74, both hemispheres 30.9
2113 Female, age 91, right hemisphere 30.3
Hippocampus, CA3
nTPM: 31.3
1867 Male, age 76, both hemispheres 33.6
2137 Male, age 80, left hemisphere 32.3
2861 Female, age 67, both hemispheres 31.0
2620 Female, age 94, left hemisphere 30.8
1891 Female, age 85, both hemispheres 30.2
2436 Male, age 74, both hemispheres 30.0
Parahippocampal cortex
nTPM: 30.9
1933 Female, age 85, both hemispheres 32.4
2532 Female, age 72, left hemisphere 32.0
2018 Male, age 76, both hemispheres 31.6
1990 Female, age 91, right hemisphere 31.3
1850 Male, age 80, both hemispheres 31.2
2245 Female, age 91, both hemispheres 30.6
2692 Male, age 74, both hemispheres 30.4
2250 Female, age 67, right hemisphere 30.3
2622 Female, age 67, right hemisphere 29.9
2693 Female, age 94, both hemispheres 28.9
Perirhinal gyrus
nTPM: 31.6
1841 Female, age 85, right hemisphere 32.8
1847 Female, age 91, left hemisphere 32.5
1794 Male, age 80, right hemisphere 31.8
2848 Male, age 76, right hemisphere 31.5
2521 Female, age 94, right hemisphere 29.5
Subiculum
nTPM: 30.6
1977 Female, age 85, both hemispheres 32.2
2619 Male, age 74, both hemispheres 31.6
1901 Male, age 80, both hemispheres 31.3
2042 Male, age 76, both hemispheres 30.2
2438 Female, age 94, left hemisphere 29.4
2729 Female, age 91, right hemisphere 29.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.6
Samples: 197

Max nTPM: 82.1
Min nTPM: 22.8
Std nTPM: 9.3
Median nTPM: 43.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 82.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 78.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 77.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 72.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 70.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 68.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 66.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 65.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 64.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 63.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 62.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.3
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 33.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 11.8
Min nTPM: 7.6
Sample A Female 11.8
Sample B Female 8.5
Sample C Male 9.2
Sample D Male 7.6
Entorhinal cortex
nTPM: 7.5
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.5
Sample A Female 6.5
Sample B Female 8.2
Sample C Male 8.0
Sample D Male 7.1
Subiculum
nTPM: 7.6
Samples: 4

Max nTPM: 9.7
Min nTPM: 6.4
Sample A Female 9.7
Sample B Female 7.3
Sample C Male 7.0
Sample D Male 6.4
Ventral hippocampus
nTPM: 8.6
Samples: 4

Max nTPM: 9.8
Min nTPM: 6.5
Sample A Female 8.8
Sample B Female 6.5
Sample C Male 9.8
Sample D Male 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.1
Samples: 4

Max nTPM: 41.3
Min nTPM: 36.6
Sample A Male 38.0
Sample B Male 40.5
Sample C Female 41.3
Sample D Female 36.6
Hippocampal formation
nTPM: 40.2
Samples: 4

Max nTPM: 44.5
Min nTPM: 37.6
Sample A Male 37.6
Sample B Male 38.5
Sample C Female 40.0
Sample D Female 44.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
69782324 Antisense, RP_050505_02_G04, Mouse strain C57BL/6J (56 days, male) 0.5

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