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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:11.7 nTPM
HPA:11.7 nTPM
GTEx:17.7 nTPM
FANTOM5:21.3 Scaled Tags Per Million
Pig:2.3 nTPM
Mouse:12.9 nTPM
Allen mouse:19.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041994
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.7
Sample id Sample description nTPM
Hippocampus
nTPM: 10.6
2621 Female, age 67, right hemisphere 14.6
2148 Female, age 91, left hemisphere 10.9
1911 Female, age 85, right hemisphere 10.5
2529 Female, age 94, left hemisphere 10.2
1898 Male, age 80, left hemisphere 9.0
1855 Male, age 76, left hemisphere 8.2
Dentate gyrus
nTPM: 10.3
2531 Female, age 67, both hemispheres 12.9
1927 Female, age 91, both hemispheres 12.2
2530 Female, age 94, left hemisphere 11.0
2246 Female, age 85, both hemispheres 9.5
2528 Male, age 74, both hemispheres 9.4
2010 Male, age 76, both hemispheres 6.8
Entorhinal gyrus
nTPM: 9.1
2613 Female, age 94, left hemisphere 12.3
1787 Male, age 76, left hemisphere 10.2
2764 Male, age 80, right hemisphere 10.1
2686 Male, age 75, right hemisphere 8.4
1938 Female, age 85, left hemisphere 7.9
2117 Female, age 91, right hemisphere 5.5
Hippocampus, CA1
nTPM: 9.8
2749 Male, age 80, left hemisphere 14.2
2527 Male, age 74, both hemispheres 11.1
1873 Female, age 85, both hemispheres 10.4
2045 Male, age 76, both hemispheres 6.7
2082 Female, age 91, right hemisphere 6.6
Hippocampus, CA2
nTPM: 9.5
2437 Female, age 94, left hemisphere 14.0
1892 Male, age 76, both hemispheres 11.9
1963 Male, age 80, left hemisphere 9.4
2249 Male, age 74, both hemispheres 8.6
2113 Female, age 91, right hemisphere 7.9
1940 Female, age 85, left hemisphere 5.3
Hippocampus, CA3
nTPM: 11.7
2861 Female, age 67, both hemispheres 16.7
2137 Male, age 80, left hemisphere 14.3
2620 Female, age 94, left hemisphere 12.6
1867 Male, age 76, both hemispheres 10.3
1891 Female, age 85, both hemispheres 8.4
2436 Male, age 74, both hemispheres 7.9
Parahippocampal cortex
nTPM: 9.9
2250 Female, age 67, right hemisphere 14.0
2245 Female, age 91, both hemispheres 13.1
2622 Female, age 67, right hemisphere 11.2
2693 Female, age 94, both hemispheres 11.0
1990 Female, age 91, right hemisphere 10.5
2692 Male, age 74, both hemispheres 9.5
2532 Female, age 72, left hemisphere 8.4
1850 Male, age 80, both hemispheres 7.9
1933 Female, age 85, both hemispheres 7.0
2018 Male, age 76, both hemispheres 6.7
Perirhinal gyrus
nTPM: 8.4
2521 Female, age 94, right hemisphere 11.3
1847 Female, age 91, left hemisphere 10.0
1794 Male, age 80, right hemisphere 8.9
2848 Male, age 76, right hemisphere 6.0
1841 Female, age 85, right hemisphere 5.9
Subiculum
nTPM: 9.6
2438 Female, age 94, left hemisphere 16.4
2619 Male, age 74, both hemispheres 11.5
1901 Male, age 80, both hemispheres 9.2
1977 Female, age 85, both hemispheres 7.9
2729 Female, age 91, right hemisphere 6.5
2042 Male, age 76, both hemispheres 6.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.7
Samples: 197

Max nTPM: 40.2
Min nTPM: 0.9
Std nTPM: 7.9
Median nTPM: 17.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 40.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 39.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 37.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 37.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 33.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 33.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 32.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 32.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 32.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 32.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 31.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.3
FF:10153-102I9 76 years, female 22.7
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1.9
Samples: 4

Max nTPM: 2.2
Min nTPM: 1.5
Sample A Female 2.2
Sample B Female 2.2
Sample C Male 1.8
Sample D Male 1.5
Entorhinal cortex
nTPM: 2.3
Samples: 4

Max nTPM: 2.9
Min nTPM: 2.0
Sample A Female 2.2
Sample B Female 2.9
Sample C Male 2.0
Sample D Male 2.2
Subiculum
nTPM: 1.7
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.1
Sample A Female 2.6
Sample B Female 1.4
Sample C Male 1.5
Sample D Male 1.1
Ventral hippocampus
nTPM: 2.3
Samples: 4

Max nTPM: 3.3
Min nTPM: 1.4
Sample A Female 1.4
Sample B Female 1.4
Sample C Male 3.3
Sample D Male 3.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 14.7
Min nTPM: 11.2
Sample A Male 14.7
Sample B Male 13.0
Sample C Female 12.5
Sample D Female 11.2
Hippocampal formation
nTPM: 12.7
Samples: 4

Max nTPM: 13.4
Min nTPM: 12.3
Sample A Male 12.3
Sample B Male 12.7
Sample C Female 13.4
Sample D Female 12.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.1
71380538 Antisense, RP_050419_02_E05, Mouse strain C57BL/6J (56 days, male) 19.1

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