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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		82.470
RNA expressioni
Consensus:5.5 nTPM
HPA:5.5 nTPM
GTEx:15.4 nTPM
FANTOM5:10.0 Scaled Tags Per Million
Pig:7.1 nTPM
Mouse:55.3 nTPM
Allen mouse:0.4 Expression energy

AMYGDALA - Mouse brain profilei , antibody CAB079780
Amygdala mean intensity 82.470
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 6.554
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 5.090
Cortical amygdala 49.184
Central amygdala 82.470
Medial amygdaloid nucleus 4.791

AMYGDALA - HPA Brain RNA-seq
Max nTPM 5.5
Sample id Sample description nTPM
Amygdala
nTPM: 5.3
2517 Female, age 94, left hemisphere 6.2
2514 Male, age 75, right hemisphere 5.7
1987 Female, age 91, left hemisphere 5.2
2695 Female, age 67, right hemisphere 4.8
2814 Male, age 76, right hemisphere 4.4
Basal amygdala
nTPM: 5.4
2110 Male, age 80, left hemisphere 5.7
2685 Female, age 94, left hemisphere 5.6
2609 Male, age 75, right hemisphere 5.5
2827 Female, age 67, right hemisphere 5.5
1955 Male, age 76, both hemispheres 5.2
2243 Female, age 91, right hemisphere 5.2
Central amygdala
nTPM: 5.2
2826 Female, age 94, left hemisphere 6.2
2239 Male, age 80, left hemisphere 5.6
2515 Male, age 75, right hemisphere 5.2
2701 Female, age 91, right hemisphere 4.6
1905 Male, age 76, both hemispheres 4.4
Corticomedial amygdala
nTPM: 5.5
2428 Male, age 75, right hemisphere 5.7
2829 Male, age 80, left hemisphere 5.6
2240 Male, age 76, both hemispheres 5.5
2242 Female, age 91, right hemisphere 5.5
2429 Female, age 94, left hemisphere 5.5
2535 Female, age 67, right hemisphere 5.3
Lateral amygdala
nTPM: 5.3
2534 Female, age 94, left hemisphere 5.8
2830 Female, age 67, right hemisphere 5.8
2516 Male, age 75, right hemisphere 5.7
1883 Male, age 76, both hemispheres 4.9
2255 Female, age 91, right hemisphere 4.8
2256 Male, age 80, left hemisphere 4.6
Stria terminalis, bed nucleus
nTPM: 5.0
1974 Female, age 91, both hemispheres 5.3
2486 Female, age 94, both hemispheres 5.1
2201 Male, age 74, unknown 4.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 15.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 15.4
Samples: 152

Max nTPM: 55.8
Min nTPM: 0.3
Std nTPM: 9.4
Median nTPM: 13.4
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 55.8
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 41.3
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 39.0
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 37.1
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 34.6
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 34.4
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 33.6
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 32.0
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 32.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 31.8
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 30.4
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 10.0
FF:10151-102I7 76 years, female 10.0

AMYGDALA - Pig RNA-seqi
Average nTPM 7.1
Pig sample Sample description nTPM
Amygdala
nTPM: 7.1
Samples: 4

Max nTPM: 7.9
Min nTPM: 6.2
Sample A Female 7.9
Sample B Female 7.5
Sample C Male 6.2
Sample D Male 6.6

AMYGDALA - Mouse RNA-seqi
Average nTPM 55.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 55.3
Samples: 4

Max nTPM: 62.6
Min nTPM: 48.1
Sample A Male 48.1
Sample B Male 62.6
Sample C Female 56.3
Sample D Female 54.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.4
77371835 Antisense, RP_070116_02_E09, Mouse strain C57BL/6J (56 days, male) 1.1
1102 Antisense, RP_Baylor_103105, Mouse strain C57BL/6J (56 days, male) 0.2
1103 Sense, RPS_Baylor_37065, Mouse strain C57BL/6J (56 days, male) 0.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.