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IMMP1L
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:42.0 nTPM
HPA:42.0 nTPM
GTEx:27.0 nTPM
FANTOM5:15.5 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:41.7 nTPM

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 42.0
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 41.3
2219 Male, age 76, both hemispheres 42.0
1827 Male, age 72, unknown 41.9
1870 Female, age 42, unknown 41.8
2828 Female, age 72, unknown 41.6
2411 Female, age 72, unknown 41.5
1833 Male, age 53, unknown 41.3
1830 Male, age 51, unknown 41.2
2019 Male, age 18, unknown 41.0
2666 Male, age 74, left hemisphere 40.4
2586 Male, age 75, left hemisphere 40.1
Dorsal raphe nucleus
nTPM: 41.0
2750 Male, age 76, both hemispheres 41.3
2298 Female, age 72, unknown 41.2
2047 Male, age 72, unknown 41.0
1828 Male, age 53, unknown 40.9
2016 Female, age 72, unknown 40.8
Inferior colliculus
nTPM: 41.6
1848 Female, age 42, unknown 41.9
1890 Male, age 53, unknown 41.7
2097 Female, age 72, unknown 41.7
2849 Male, age 72, unknown 41.1
Median raphe nucleus
nTPM: 40.9
2220 Male, age 76, midline 40.9
Pedunculopontine tegmental nucleus
nTPM: 42.0
1921 Female, age 85, both hemispheres 42.6
2338 Male, age 61, both hemispheres 42.1
2334 Male, age 80, both hemispheres 41.2
Periaquaductal grey, anterior
nTPM: 41.8
1947 Male, age 18, unknown 42.3
1795 Male, age 51, unknown 41.8
2502 Female, age 75, unknown 41.3
Periaquaductal grey, dorsal
nTPM: 41.9
1840 Male, age 53, unknown 43.1
2464 Female, age 72, unknown 42.0
2850 Male, age 76, both hemispheres 41.8
1831 Male, age 72, unknown 40.9
Periaquaductal grey, lateral
nTPM: 40.9
2140 Male, age 76, both hemispheres 41.2
2053 Male, age 18, unknown 41.0
2272 Male, age 74, both hemispheres 40.5
Pretectal area
nTPM: 41.7
1817 Female, age 42, unknown 42.6
2007 Male, age 72, unknown 42.2
1816 Male, age 51, unknown 42.1
2224 Female, age 72, unknown 41.9
2825 Male, age 18, unknown 41.9
1944 Female, age 72, unknown 41.7
2667 Female, age 75, unknown 41.6
2273 Male, age 74, both hemispheres 41.5
2316 Male, age 76, right hemisphere 41.5
1815 Male, age 53, unknown 41.3
2407 Male, age 75, both hemispheres 40.7
Red nucleus
nTPM: 41.8
2725 Female, age 75, unknown 42.4
2227 Male, age 72, unknown 42.2
2769 Male, age 72, unknown 42.2
1821 Female, age 72, unknown 42.1
1954 Female, age 42, unknown 42.1
1904 Male, age 53, unknown 41.9
2503 Female, age 72, unknown 41.9
2823 Male, age 76, right hemisphere 41.8
2584 Male, age 75, left hemisphere 41.3
2588 Male, age 74, left hemisphere 41.1
2785 Male, age 18, unknown 41.1
1865 Male, age 51, unknown 40.9
Substantia nigra
nTPM: 41.5
1851 Male, age 51, unknown 42.0
2699 Male, age 18, unknown 41.9
2409 Female, age 72, unknown 41.8
1889 Female, age 72, unknown 41.6
1941 Male, age 53, unknown 41.6
2241 Male, age 72, unknown 41.4
2590 Female, age 75, unknown 41.4
2665 Male, age 74, both hemispheres 41.4
2583 Male, age 75, right hemisphere 41.2
1916 Female, age 42, unknown 40.8
Superior colliculus
nTPM: 41.9
2587 Male, age 74, left hemisphere 43.2
1895 Male, age 76, right hemisphere 42.9
2668 Female, age 75, unknown 41.9
2087 Female, age 72, unknown 41.8
1839 Male, age 51, unknown 41.7
2261 Male, age 18, unknown 41.7
1796 Male, age 53, unknown 41.6
1913 Female, age 42, unknown 41.5
1995 Male, age 72, unknown 41.5
2664 Male, age 75, both hemispheres 41.4
Ventral tegmental area
nTPM: 41.5
2410 Female, age 72, unknown 41.9
1942 Male, age 51, unknown 41.8
1915 Female, age 42, unknown 41.7
2218 Male, age 76, both hemispheres 41.5
2223 Female, age 72, unknown 41.3
2021 Male, age 53, unknown 41.1

MIDBRAIN - GTEx RNA-seqi
Average nTPM 27.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 27.0
Samples: 139

Max nTPM: 51.1
Min nTPM: 12.3
Std nTPM: 8.0
Median nTPM: 25.7
GTEX-OXRO-0011-R2A-SM-3NB1W 60-69 years, female 51.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 50.6
GTEX-12ZZX-0011-R2a-SM-5EGLG 40-49 years, female 47.8
GTEX-11GS4-0011-R2a-SM-DO942 60-69 years, male 46.6
GTEX-12WSH-0011-R2a-SM-5GU68 50-59 years, male 44.6
GTEX-11EMC-0011-R2b-SM-DO114 60-69 years, female 44.1
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 43.7
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 42.7
GTEX-1F75B-0011-R2a-SM-ARL8I 50-59 years, male 41.6
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 40.5
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 40.3
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 15.5
FF:10158-103A5 76 years, female 15.5

MIDBRAIN - Pig RNA-seqi
Average nTPM 16.1
Pig sample Sample description nTPM
Midbrain
nTPM: 16.1
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.9
Sample A Female 18.0
Sample B Female 16.5
Sample C Male 15.1
Sample D Male 14.9
Periaqueductal gray
nTPM: 13.2
Samples: 3

Max nTPM: 13.6
Min nTPM: 12.9
Sample B Female 13.1
Sample C Male 12.9
Sample D Male 13.6
Substantia nigra
nTPM: 14.4
Samples: 4

Max nTPM: 19.3
Min nTPM: 11.7
Sample A Female 19.3
Sample B Female 13.0
Sample C Male 13.4
Sample D Male 11.7
Superior colliculi
nTPM: 15.3
Samples: 4

Max nTPM: 18.1
Min nTPM: 13.5
Sample A Female 18.1
Sample B Female 13.6
Sample C Male 16.0
Sample D Male 13.5

MIDBRAIN - Mouse RNA-seqi
Average nTPM 41.7
Mouse sample Sample description nTPM
Midbrain
nTPM: 41.7
Samples: 4

Max nTPM: 43.0
Min nTPM: 39.6
Sample A Male 42.4
Sample B Male 41.6
Sample C Female 39.6
Sample D Female 43.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.