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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:42.3 nTPM
HPA:42.3 nTPM
GTEx:18.8 nTPM
FANTOM5:93.5 Scaled Tags Per Million
Pig:51.5 nTPM
Mouse:39.1 nTPM
Allen mouse:7.5 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 42.3
Sample id Sample description nTPM
Amygdala
nTPM: 42.3
2814 Male, age 76, right hemisphere 53.2
2514 Male, age 75, right hemisphere 45.6
2695 Female, age 67, right hemisphere 43.0
2517 Female, age 94, left hemisphere 35.6
1987 Female, age 91, left hemisphere 34.1
Basal amygdala
nTPM: 34.8
2609 Male, age 75, right hemisphere 51.1
1955 Male, age 76, both hemispheres 40.6
2243 Female, age 91, right hemisphere 38.3
2110 Male, age 80, left hemisphere 31.4
2685 Female, age 94, left hemisphere 25.9
2827 Female, age 67, right hemisphere 21.4
Central amygdala
nTPM: 39.0
1905 Male, age 76, both hemispheres 54.0
2515 Male, age 75, right hemisphere 51.5
2826 Female, age 94, left hemisphere 32.5
2239 Male, age 80, left hemisphere 29.2
2701 Female, age 91, right hemisphere 28.0
Corticomedial amygdala
nTPM: 39.5
2428 Male, age 75, right hemisphere 57.3
2829 Male, age 80, left hemisphere 44.3
2240 Male, age 76, both hemispheres 43.0
2242 Female, age 91, right hemisphere 35.5
2429 Female, age 94, left hemisphere 30.6
2535 Female, age 67, right hemisphere 26.2
Lateral amygdala
nTPM: 37.8
2516 Male, age 75, right hemisphere 55.3
1883 Male, age 76, both hemispheres 44.5
2255 Female, age 91, right hemisphere 42.5
2256 Male, age 80, left hemisphere 32.0
2534 Female, age 94, left hemisphere 31.5
2830 Female, age 67, right hemisphere 21.2
Stria terminalis, bed nucleus
nTPM: 28.0
2486 Female, age 94, both hemispheres 29.9
1974 Female, age 91, both hemispheres 28.8
2201 Male, age 74, unknown 25.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 18.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 18.8
Samples: 152

Max nTPM: 36.7
Min nTPM: 6.1
Std nTPM: 5.2
Median nTPM: 18.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 36.7
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 34.1
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 30.2
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 29.0
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 28.8
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 28.6
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 27.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 27.8
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 27.7
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 27.5
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 27.2
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 93.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 93.5
FF:10151-102I7 76 years, female 93.5

AMYGDALA - Pig RNA-seqi
Average nTPM 51.5
Pig sample Sample description nTPM
Amygdala
nTPM: 51.5
Samples: 4

Max nTPM: 57.3
Min nTPM: 42.2
Sample A Female 56.2
Sample B Female 57.3
Sample C Male 42.2
Sample D Male 50.4

AMYGDALA - Mouse RNA-seqi
Average nTPM 39.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 39.1
Samples: 4

Max nTPM: 43.8
Min nTPM: 36.1
Sample A Male 43.8
Sample B Male 36.5
Sample C Female 36.1
Sample D Female 39.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 7.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 7.5
69873594 Antisense, RP_050512_01_E12, Mouse strain C57BL/6J (56 days, male) 15.0
71158349 Antisense, RP_050810_01_F12, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.