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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:928.0 nTPM
HPA:928.0 nTPM
GTEx:709.5 nTPM
FANTOM5:305.0 Scaled Tags Per Million
Mouse:590.1 nTPM
Allen mouse:10.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059015
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 928.0
Sample id Sample description nTPM
Hippocampus
nTPM: 928.0
1898 Male, age 80, left hemisphere 959.7
2529 Female, age 94, left hemisphere 955.3
2621 Female, age 67, right hemisphere 927.8
1911 Female, age 85, right hemisphere 915.2
1855 Male, age 76, left hemisphere 914.4
2148 Female, age 91, left hemisphere 895.8
Dentate gyrus
nTPM: 916.1
2010 Male, age 76, both hemispheres 953.2
2530 Female, age 94, left hemisphere 929.4
2531 Female, age 67, both hemispheres 915.7
2246 Female, age 85, both hemispheres 902.5
2528 Male, age 74, both hemispheres 900.1
1927 Female, age 91, both hemispheres 896.0
Entorhinal gyrus
nTPM: 919.8
2686 Male, age 75, right hemisphere 942.5
1787 Male, age 76, left hemisphere 926.1
2117 Female, age 91, right hemisphere 920.7
1938 Female, age 85, left hemisphere 917.4
2764 Male, age 80, right hemisphere 917.2
2613 Female, age 94, left hemisphere 895.0
Hippocampus, CA1
nTPM: 913.2
2749 Male, age 80, left hemisphere 936.1
2045 Male, age 76, both hemispheres 916.6
2082 Female, age 91, right hemisphere 906.2
1873 Female, age 85, both hemispheres 905.4
2527 Male, age 74, both hemispheres 901.7
Hippocampus, CA2
nTPM: 910.5
1963 Male, age 80, left hemisphere 930.2
2437 Female, age 94, left hemisphere 909.4
1892 Male, age 76, both hemispheres 907.9
2249 Male, age 74, both hemispheres 907.7
2113 Female, age 91, right hemisphere 907.0
1940 Female, age 85, left hemisphere 901.2
Hippocampus, CA3
nTPM: 902.0
1867 Male, age 76, both hemispheres 928.9
1891 Female, age 85, both hemispheres 915.4
2861 Female, age 67, both hemispheres 908.1
2137 Male, age 80, left hemisphere 904.0
2436 Male, age 74, both hemispheres 881.3
2620 Female, age 94, left hemisphere 874.4
Parahippocampal cortex
nTPM: 902.1
2018 Male, age 76, both hemispheres 949.7
1933 Female, age 85, both hemispheres 922.4
2250 Female, age 67, right hemisphere 916.1
1990 Female, age 91, right hemisphere 901.2
2245 Female, age 91, both hemispheres 900.3
2532 Female, age 72, left hemisphere 900.0
1850 Male, age 80, both hemispheres 899.8
2692 Male, age 74, both hemispheres 890.7
2622 Female, age 67, right hemisphere 886.1
2693 Female, age 94, both hemispheres 855.0
Perirhinal gyrus
nTPM: 907.3
1847 Female, age 91, left hemisphere 926.7
1794 Male, age 80, right hemisphere 917.2
1841 Female, age 85, right hemisphere 912.7
2521 Female, age 94, right hemisphere 892.7
2848 Male, age 76, right hemisphere 887.1
Subiculum
nTPM: 916.7
2042 Male, age 76, both hemispheres 932.2
1977 Female, age 85, both hemispheres 926.9
1901 Male, age 80, both hemispheres 919.9
2619 Male, age 74, both hemispheres 917.6
2438 Female, age 94, left hemisphere 906.0
2729 Female, age 91, right hemisphere 897.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 709.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 709.5
Samples: 197

Max nTPM: 1650.4
Min nTPM: 307.9
Std nTPM: 225.2
Median nTPM: 663.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1650.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1596.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1411.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1346.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1287.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1278.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1252.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1243.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 1222.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1200.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1146.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 305.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 305.0
FF:10153-102I9 76 years, female 346.4
FF:10169-103B7 60 years, female 263.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 590.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 590.2
Samples: 4

Max nTPM: 611.6
Min nTPM: 570.4
Sample A Male 598.6
Sample B Male 611.6
Sample C Female 580.0
Sample D Female 570.4
Hippocampal formation
nTPM: 582.1
Samples: 4

Max nTPM: 630.1
Min nTPM: 546.2
Sample A Male 589.9
Sample B Male 562.3
Sample C Female 546.2
Sample D Female 630.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.6
74580990 Antisense, RP_060215_02_C09, Mouse strain C57BL/6J (56 days, male) 10.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.