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CCT5
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:72.7 nTPM
HPA:72.7 nTPM
GTEx:54.4 nTPM
FANTOM5:65.4 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:229.8 nTPM
Allen mouse:15.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002238Antibody HPA005958Antibody CAB006271
Glial cells MediumMediumNot detected
Neuronal cells MediumMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.7
Sample id Sample description nTPM
Hippocampus
nTPM: 68.7
1898 Male, age 80, left hemisphere 73.8
1855 Male, age 76, left hemisphere 71.8
2529 Female, age 94, left hemisphere 68.8
2621 Female, age 67, right hemisphere 67.3
2148 Female, age 91, left hemisphere 66.0
1911 Female, age 85, right hemisphere 64.5
Dentate gyrus
nTPM: 68.5
2010 Male, age 76, both hemispheres 78.3
1927 Female, age 91, both hemispheres 70.7
2246 Female, age 85, both hemispheres 69.5
2530 Female, age 94, left hemisphere 66.4
2528 Male, age 74, both hemispheres 64.9
2531 Female, age 67, both hemispheres 61.6
Entorhinal gyrus
nTPM: 64.1
2764 Male, age 80, right hemisphere 68.6
1787 Male, age 76, left hemisphere 66.9
1938 Female, age 85, left hemisphere 66.8
2117 Female, age 91, right hemisphere 64.4
2686 Male, age 75, right hemisphere 59.3
2613 Female, age 94, left hemisphere 58.7
Hippocampus, CA1
nTPM: 72.7
2749 Male, age 80, left hemisphere 84.7
2045 Male, age 76, both hemispheres 76.6
1873 Female, age 85, both hemispheres 73.6
2527 Male, age 74, both hemispheres 65.9
2082 Female, age 91, right hemisphere 62.4
Hippocampus, CA2
nTPM: 70.0
1892 Male, age 76, both hemispheres 81.0
1963 Male, age 80, left hemisphere 78.9
2249 Male, age 74, both hemispheres 69.4
2437 Female, age 94, left hemisphere 65.4
1940 Female, age 85, left hemisphere 64.1
2113 Female, age 91, right hemisphere 61.5
Hippocampus, CA3
nTPM: 67.9
1867 Male, age 76, both hemispheres 73.7
2137 Male, age 80, left hemisphere 73.2
2436 Male, age 74, both hemispheres 69.4
1891 Female, age 85, both hemispheres 66.3
2620 Female, age 94, left hemisphere 63.3
2861 Female, age 67, both hemispheres 61.6
Parahippocampal cortex
nTPM: 65.2
1933 Female, age 85, both hemispheres 70.8
1850 Male, age 80, both hemispheres 68.3
2532 Female, age 72, left hemisphere 67.4
2245 Female, age 91, both hemispheres 67.3
2250 Female, age 67, right hemisphere 66.9
2018 Male, age 76, both hemispheres 66.3
1990 Female, age 91, right hemisphere 65.2
2692 Male, age 74, both hemispheres 63.2
2693 Female, age 94, both hemispheres 59.5
2622 Female, age 67, right hemisphere 57.4
Perirhinal gyrus
nTPM: 69.9
1847 Female, age 91, left hemisphere 75.8
1841 Female, age 85, right hemisphere 70.9
2848 Male, age 76, right hemisphere 68.2
1794 Male, age 80, right hemisphere 68.1
2521 Female, age 94, right hemisphere 66.3
Subiculum
nTPM: 65.8
1977 Female, age 85, both hemispheres 69.5
2042 Male, age 76, both hemispheres 69.1
1901 Male, age 80, both hemispheres 67.7
2729 Female, age 91, right hemisphere 64.4
2438 Female, age 94, left hemisphere 62.2
2619 Male, age 74, both hemispheres 61.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.4
Samples: 197

Max nTPM: 162.8
Min nTPM: 27.6
Std nTPM: 18.2
Median nTPM: 49.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 162.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 105.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 104.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 103.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 96.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 94.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 94.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 86.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 86.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 86.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 85.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.4
FF:10169-103B7 60 years, female 80.5
FF:10153-102I9 76 years, female 50.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 26.9
Min nTPM: 15.4
Sample A Female 26.9
Sample B Female 20.2
Sample C Male 19.9
Sample D Male 15.4
Entorhinal cortex
nTPM: 14.6
Samples: 4

Max nTPM: 15.6
Min nTPM: 12.1
Sample A Female 15.3
Sample B Female 15.5
Sample C Male 15.6
Sample D Male 12.1
Subiculum
nTPM: 16.7
Samples: 4

Max nTPM: 21.0
Min nTPM: 14.3
Sample A Female 21.0
Sample B Female 15.1
Sample C Male 16.4
Sample D Male 14.3
Ventral hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 22.9
Min nTPM: 13.4
Sample A Female 19.8
Sample B Female 13.4
Sample C Male 22.9
Sample D Male 19.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 229.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 179.8
Samples: 4

Max nTPM: 198.0
Min nTPM: 165.8
Sample A Male 165.8
Sample B Male 177.0
Sample C Female 198.0
Sample D Female 178.2
Hippocampal formation
nTPM: 229.8
Samples: 4

Max nTPM: 245.8
Min nTPM: 212.2
Sample A Male 240.3
Sample B Male 220.8
Sample C Female 245.8
Sample D Female 212.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.0
69540549 Antisense, RP_050426_02_A02, Mouse strain C57BL/6J (56 days, male) 15.0

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The Human Protein Atlas

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