ABOUTMENU
HELP
NEWS
VPS26B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:42.4 nTPM
HPA:42.4 nTPM
GTEx:35.0 nTPM
FANTOM5:67.1 Scaled Tags Per Million
Pig:26.0 nTPM
Mouse:76.6 nTPM
Allen mouse:5.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038172
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.4
Sample id Sample description nTPM
Hippocampus
nTPM: 40.1
1898 Male, age 80, left hemisphere 45.4
2148 Female, age 91, left hemisphere 42.4
2621 Female, age 67, right hemisphere 41.5
1855 Male, age 76, left hemisphere 38.9
2529 Female, age 94, left hemisphere 36.4
1911 Female, age 85, right hemisphere 36.3
Dentate gyrus
nTPM: 40.8
1927 Female, age 91, both hemispheres 47.3
2531 Female, age 67, both hemispheres 42.6
2010 Male, age 76, both hemispheres 40.7
2530 Female, age 94, left hemisphere 38.8
2528 Male, age 74, both hemispheres 37.9
2246 Female, age 85, both hemispheres 37.5
Entorhinal gyrus
nTPM: 39.9
2764 Male, age 80, right hemisphere 43.4
2613 Female, age 94, left hemisphere 42.7
1787 Male, age 76, left hemisphere 40.9
1938 Female, age 85, left hemisphere 40.9
2686 Male, age 75, right hemisphere 36.2
2117 Female, age 91, right hemisphere 35.0
Hippocampus, CA1
nTPM: 42.4
2749 Male, age 80, left hemisphere 54.6
1873 Female, age 85, both hemispheres 44.6
2045 Male, age 76, both hemispheres 43.0
2527 Male, age 74, both hemispheres 37.7
2082 Female, age 91, right hemisphere 32.0
Hippocampus, CA2
nTPM: 38.3
1892 Male, age 76, both hemispheres 47.0
1963 Male, age 80, left hemisphere 42.4
2437 Female, age 94, left hemisphere 36.2
1940 Female, age 85, left hemisphere 35.7
2249 Male, age 74, both hemispheres 35.5
2113 Female, age 91, right hemisphere 32.8
Hippocampus, CA3
nTPM: 42.1
2137 Male, age 80, left hemisphere 48.2
2620 Female, age 94, left hemisphere 47.0
2861 Female, age 67, both hemispheres 46.0
1867 Male, age 76, both hemispheres 40.7
2436 Male, age 74, both hemispheres 35.5
1891 Female, age 85, both hemispheres 35.3
Parahippocampal cortex
nTPM: 37.3
1850 Male, age 80, both hemispheres 40.8
1933 Female, age 85, both hemispheres 40.6
2245 Female, age 91, both hemispheres 40.4
1990 Female, age 91, right hemisphere 37.7
2018 Male, age 76, both hemispheres 36.7
2622 Female, age 67, right hemisphere 36.6
2250 Female, age 67, right hemisphere 36.4
2532 Female, age 72, left hemisphere 35.3
2693 Female, age 94, both hemispheres 35.0
2692 Male, age 74, both hemispheres 33.7
Perirhinal gyrus
nTPM: 42.4
1847 Female, age 91, left hemisphere 47.8
1794 Male, age 80, right hemisphere 43.8
2521 Female, age 94, right hemisphere 41.3
1841 Female, age 85, right hemisphere 40.9
2848 Male, age 76, right hemisphere 37.9
Subiculum
nTPM: 36.2
1901 Male, age 80, both hemispheres 40.8
1977 Female, age 85, both hemispheres 37.6
2729 Female, age 91, right hemisphere 37.1
2042 Male, age 76, both hemispheres 35.1
2619 Male, age 74, both hemispheres 34.6
2438 Female, age 94, left hemisphere 32.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.0
Samples: 197

Max nTPM: 61.0
Min nTPM: 9.3
Std nTPM: 10.7
Median nTPM: 33.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 61.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 60.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 58.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 57.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 57.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 54.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 54.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 53.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 53.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 53.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 53.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.1
FF:10153-102I9 76 years, female 71.4
FF:10169-103B7 60 years, female 62.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 34.5
Min nTPM: 19.6
Sample A Female 34.5
Sample B Female 29.1
Sample C Male 21.0
Sample D Male 19.6
Entorhinal cortex
nTPM: 24.8
Samples: 4

Max nTPM: 28.2
Min nTPM: 21.0
Sample A Female 23.9
Sample B Female 26.0
Sample C Male 28.2
Sample D Male 21.0
Subiculum
nTPM: 24.6
Samples: 4

Max nTPM: 30.7
Min nTPM: 22.0
Sample A Female 30.7
Sample B Female 22.1
Sample C Male 23.4
Sample D Male 22.0
Ventral hippocampus
nTPM: 25.5
Samples: 4

Max nTPM: 30.9
Min nTPM: 18.1
Sample A Female 24.6
Sample B Female 18.1
Sample C Male 30.9
Sample D Male 28.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 76.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.3
Samples: 4

Max nTPM: 76.8
Min nTPM: 65.6
Sample A Male 65.6
Sample B Male 67.3
Sample C Female 71.4
Sample D Female 76.8
Hippocampal formation
nTPM: 76.7
Samples: 4

Max nTPM: 83.5
Min nTPM: 71.7
Sample A Male 73.8
Sample B Male 77.6
Sample C Female 83.5
Sample D Female 71.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
68745263 Antisense, RP_050210_01_E12, Mouse strain C57BL/6J (56 days, male) 5.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.