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GABRA2
HIPPOCAMPAL FORMATION - Expression summary
Mouse brain, Intensity
Hippocampal formationi 		125.439
Protein expressioni No data
RNA expressioni
Consensus:29.4 nTPM
HPA:29.4 nTPM
GTEx:17.2 nTPM
FANTOM5:385.1 Scaled Tags Per Million
Pig:144.0 nTPM
Mouse:68.5 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079061
Hippocampal formation mean intensity 125.439
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 100.595
Molecular layer of the dentate gyrus 99.264
Granular dentate gyrus 91.537
CA1 - oriens layer 99.223
CA1 - pyramidal layer 82.435
CA1 - radiatum layer 99.645
CA2 - oriens layer 106.041
CA2 - pyramidal layer 97.415
CA2 - radiatum layer 107.459
CA3 - oriens layer 107.798
CA3 - pyramidal layer 90.410
CA3 - radiatum layer 110.673
Stratum lucidum 104.106
Lacunosum moleculare 92.807
Subiculum 79.871

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.4
Sample id Sample description nTPM
Hippocampus
nTPM: 21.1
1898 Male, age 80, left hemisphere 30.9
1855 Male, age 76, left hemisphere 25.6
2148 Female, age 91, left hemisphere 19.7
1911 Female, age 85, right hemisphere 18.8
2529 Female, age 94, left hemisphere 17.3
2621 Female, age 67, right hemisphere 14.2
Dentate gyrus
nTPM: 18.7
1927 Female, age 91, both hemispheres 27.0
2010 Male, age 76, both hemispheres 26.9
2246 Female, age 85, both hemispheres 20.4
2528 Male, age 74, both hemispheres 18.8
2530 Female, age 94, left hemisphere 10.0
2531 Female, age 67, both hemispheres 8.9
Entorhinal gyrus
nTPM: 11.4
1938 Female, age 85, left hemisphere 19.1
2117 Female, age 91, right hemisphere 15.2
1787 Male, age 76, left hemisphere 12.7
2764 Male, age 80, right hemisphere 12.3
2686 Male, age 75, right hemisphere 6.5
2613 Female, age 94, left hemisphere 2.8
Hippocampus, CA1
nTPM: 29.4
2749 Male, age 80, left hemisphere 49.1
2045 Male, age 76, both hemispheres 32.7
2527 Male, age 74, both hemispheres 25.2
1873 Female, age 85, both hemispheres 24.3
2082 Female, age 91, right hemisphere 15.8
Hippocampus, CA2
nTPM: 19.7
1963 Male, age 80, left hemisphere 26.2
1892 Male, age 76, both hemispheres 26.0
1940 Female, age 85, left hemisphere 23.5
2113 Female, age 91, right hemisphere 19.2
2249 Male, age 74, both hemispheres 14.4
2437 Female, age 94, left hemisphere 8.6
Hippocampus, CA3
nTPM: 19.3
2137 Male, age 80, left hemisphere 38.3
1867 Male, age 76, both hemispheres 22.7
1891 Female, age 85, both hemispheres 15.3
2436 Male, age 74, both hemispheres 14.6
2861 Female, age 67, both hemispheres 13.0
2620 Female, age 94, left hemisphere 12.0
Parahippocampal cortex
nTPM: 19.4
2693 Female, age 94, both hemispheres 25.5
1933 Female, age 85, both hemispheres 23.7
2250 Female, age 67, right hemisphere 23.4
2018 Male, age 76, both hemispheres 23.0
2245 Female, age 91, both hemispheres 21.5
1850 Male, age 80, both hemispheres 18.7
2622 Female, age 67, right hemisphere 17.5
2692 Male, age 74, both hemispheres 16.2
1990 Female, age 91, right hemisphere 14.1
2532 Female, age 72, left hemisphere 10.2
Perirhinal gyrus
nTPM: 27.8
2521 Female, age 94, right hemisphere 35.2
1794 Male, age 80, right hemisphere 30.5
1841 Female, age 85, right hemisphere 27.3
1847 Female, age 91, left hemisphere 26.6
2848 Male, age 76, right hemisphere 19.4
Subiculum
nTPM: 13.2
2729 Female, age 91, right hemisphere 22.6
1901 Male, age 80, both hemispheres 16.6
2619 Male, age 74, both hemispheres 15.6
1977 Female, age 85, both hemispheres 15.0
2042 Male, age 76, both hemispheres 5.1
2438 Female, age 94, left hemisphere 4.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.2
Samples: 197

Max nTPM: 49.7
Min nTPM: 2.2
Std nTPM: 8.6
Median nTPM: 16.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 49.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 43.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 41.5
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 39.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 38.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 36.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 36.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 36.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 35.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 31.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 31.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 385.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 385.1
FF:10169-103B7 60 years, female 503.2
FF:10153-102I9 76 years, female 266.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 144.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 144.0
Samples: 4

Max nTPM: 184.5
Min nTPM: 89.0
Sample A Female 184.5
Sample B Female 151.9
Sample C Male 89.0
Sample D Male 150.7
Entorhinal cortex
nTPM: 95.3
Samples: 4

Max nTPM: 105.8
Min nTPM: 80.8
Sample A Female 104.3
Sample B Female 90.3
Sample C Male 105.8
Sample D Male 80.8
Subiculum
nTPM: 93.9
Samples: 4

Max nTPM: 113.6
Min nTPM: 84.0
Sample A Female 113.6
Sample B Female 84.0
Sample C Male 89.8
Sample D Male 88.2
Ventral hippocampus
nTPM: 117.7
Samples: 4

Max nTPM: 150.5
Min nTPM: 92.0
Sample A Female 150.5
Sample B Female 95.6
Sample C Male 92.0
Sample D Male 132.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 68.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.5
Samples: 4

Max nTPM: 61.7
Min nTPM: 43.6
Sample A Male 47.3
Sample B Male 43.6
Sample C Female 61.7
Sample D Female 61.5
Hippocampal formation
nTPM: 68.5
Samples: 4

Max nTPM: 77.8
Min nTPM: 60.2
Sample A Male 65.4
Sample B Male 77.8
Sample C Female 70.6
Sample D Female 60.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
70593139 Antisense, RP_050331_02_B12, Mouse strain C57BL/6J (56 days, male) 0.7
74988690 Antisense, RP_060315_04_A07, Mouse strain C57BL/6J (56 days, male) 0.3

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