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CMIP
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:48.8 nTPM
HPA:48.8 nTPM
GTEx:31.3 nTPM
FANTOM5:182.9 Scaled Tags Per Million
Pig:77.6 nTPM
Mouse:108.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA066710
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.8
Sample id Sample description nTPM
Hippocampus
nTPM: 35.1
1855 Male, age 76, left hemisphere 42.0
2621 Female, age 67, right hemisphere 40.6
1898 Male, age 80, left hemisphere 40.3
2148 Female, age 91, left hemisphere 32.7
2529 Female, age 94, left hemisphere 29.5
1911 Female, age 85, right hemisphere 25.4
Dentate gyrus
nTPM: 34.3
2246 Female, age 85, both hemispheres 38.5
1927 Female, age 91, both hemispheres 37.7
2531 Female, age 67, both hemispheres 36.5
2010 Male, age 76, both hemispheres 34.9
2530 Female, age 94, left hemisphere 29.5
2528 Male, age 74, both hemispheres 29.0
Entorhinal gyrus
nTPM: 41.4
2613 Female, age 94, left hemisphere 50.1
2764 Male, age 80, right hemisphere 49.3
1938 Female, age 85, left hemisphere 45.1
1787 Male, age 76, left hemisphere 42.7
2686 Male, age 75, right hemisphere 35.5
2117 Female, age 91, right hemisphere 25.8
Hippocampus, CA1
nTPM: 43.4
2749 Male, age 80, left hemisphere 66.2
2045 Male, age 76, both hemispheres 42.4
2527 Male, age 74, both hemispheres 38.3
2082 Female, age 91, right hemisphere 37.1
1873 Female, age 85, both hemispheres 32.9
Hippocampus, CA2
nTPM: 35.0
1892 Male, age 76, both hemispheres 40.5
1963 Male, age 80, left hemisphere 39.9
1940 Female, age 85, left hemisphere 35.1
2113 Female, age 91, right hemisphere 33.3
2437 Female, age 94, left hemisphere 32.7
2249 Male, age 74, both hemispheres 28.6
Hippocampus, CA3
nTPM: 38.3
2137 Male, age 80, left hemisphere 64.5
2620 Female, age 94, left hemisphere 39.8
2861 Female, age 67, both hemispheres 39.1
1867 Male, age 76, both hemispheres 35.2
2436 Male, age 74, both hemispheres 27.5
1891 Female, age 85, both hemispheres 23.7
Parahippocampal cortex
nTPM: 40.1
2245 Female, age 91, both hemispheres 47.3
1933 Female, age 85, both hemispheres 45.5
2250 Female, age 67, right hemisphere 44.9
1850 Male, age 80, both hemispheres 42.8
2622 Female, age 67, right hemisphere 40.4
2532 Female, age 72, left hemisphere 39.6
2693 Female, age 94, both hemispheres 39.4
2018 Male, age 76, both hemispheres 36.4
1990 Female, age 91, right hemisphere 35.4
2692 Male, age 74, both hemispheres 29.4
Perirhinal gyrus
nTPM: 48.8
1847 Female, age 91, left hemisphere 55.6
2521 Female, age 94, right hemisphere 54.0
1794 Male, age 80, right hemisphere 52.9
1841 Female, age 85, right hemisphere 41.7
2848 Male, age 76, right hemisphere 40.1
Subiculum
nTPM: 32.1
1977 Female, age 85, both hemispheres 41.9
1901 Male, age 80, both hemispheres 37.5
2438 Female, age 94, left hemisphere 32.4
2619 Male, age 74, both hemispheres 30.4
2042 Male, age 76, both hemispheres 26.7
2729 Female, age 91, right hemisphere 23.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.3
Samples: 197

Max nTPM: 66.8
Min nTPM: 10.3
Std nTPM: 12.5
Median nTPM: 30.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 66.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 66.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 61.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 58.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 58.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 58.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 57.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 56.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 55.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 53.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 53.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 182.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 182.9
FF:10153-102I9 76 years, female 197.5
FF:10169-103B7 60 years, female 168.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 77.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 61.3
Samples: 4

Max nTPM: 71.1
Min nTPM: 46.2
Sample A Female 71.1
Sample B Female 68.3
Sample C Male 59.6
Sample D Male 46.2
Entorhinal cortex
nTPM: 63.0
Samples: 4

Max nTPM: 71.0
Min nTPM: 49.8
Sample A Female 70.9
Sample B Female 49.8
Sample C Male 71.0
Sample D Male 60.3
Subiculum
nTPM: 77.6
Samples: 4

Max nTPM: 102.5
Min nTPM: 61.8
Sample A Female 102.5
Sample B Female 67.8
Sample C Male 78.3
Sample D Male 61.8
Ventral hippocampus
nTPM: 66.9
Samples: 4

Max nTPM: 90.3
Min nTPM: 49.8
Sample A Female 65.2
Sample B Female 49.8
Sample C Male 90.3
Sample D Male 62.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 108.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 108.9
Samples: 4

Max nTPM: 143.2
Min nTPM: 92.6
Sample A Male 97.6
Sample B Male 102.0
Sample C Female 92.6
Sample D Female 143.2
Hippocampal formation
nTPM: 93.6
Samples: 4

Max nTPM: 103.4
Min nTPM: 80.6
Sample A Male 80.6
Sample B Male 103.4
Sample C Female 92.6
Sample D Female 97.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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