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SLC25A28
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:106.6 nTPM
HPA:106.6 nTPM
GTEx:69.1 nTPM
FANTOM5:17.9 Scaled Tags Per Million
Pig:25.5 nTPM
Mouse:11.9 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 106.6
Sample id Sample description nTPM
Hippocampus
nTPM: 103.5
2529 Female, age 94, left hemisphere 105.7
2621 Female, age 67, right hemisphere 104.3
2148 Female, age 91, left hemisphere 103.2
1898 Male, age 80, left hemisphere 102.9
1855 Male, age 76, left hemisphere 102.5
1911 Female, age 85, right hemisphere 102.5
Dentate gyrus
nTPM: 101.9
2530 Female, age 94, left hemisphere 102.8
2531 Female, age 67, both hemispheres 102.4
2246 Female, age 85, both hemispheres 102.2
2010 Male, age 76, both hemispheres 101.7
2528 Male, age 74, both hemispheres 101.4
1927 Female, age 91, both hemispheres 101.0
Entorhinal gyrus
nTPM: 106.6
2764 Male, age 80, right hemisphere 109.0
2686 Male, age 75, right hemisphere 107.6
1787 Male, age 76, left hemisphere 106.8
2613 Female, age 94, left hemisphere 106.5
1938 Female, age 85, left hemisphere 105.3
2117 Female, age 91, right hemisphere 104.1
Hippocampus, CA1
nTPM: 101.8
2082 Female, age 91, right hemisphere 104.6
2527 Male, age 74, both hemispheres 103.1
2045 Male, age 76, both hemispheres 100.9
2749 Male, age 80, left hemisphere 100.6
1873 Female, age 85, both hemispheres 99.7
Hippocampus, CA2
nTPM: 103.0
2113 Female, age 91, right hemisphere 105.0
2437 Female, age 94, left hemisphere 104.4
1940 Female, age 85, left hemisphere 103.6
1892 Male, age 76, both hemispheres 102.4
2249 Male, age 74, both hemispheres 102.3
1963 Male, age 80, left hemisphere 100.4
Hippocampus, CA3
nTPM: 103.4
1891 Female, age 85, both hemispheres 104.9
2620 Female, age 94, left hemisphere 103.9
2137 Male, age 80, left hemisphere 103.4
2861 Female, age 67, both hemispheres 103.1
1867 Male, age 76, both hemispheres 103.0
2436 Male, age 74, both hemispheres 101.9
Parahippocampal cortex
nTPM: 105.5
1850 Male, age 80, both hemispheres 108.2
2532 Female, age 72, left hemisphere 107.5
2622 Female, age 67, right hemisphere 107.5
2692 Male, age 74, both hemispheres 107.0
1990 Female, age 91, right hemisphere 106.9
2693 Female, age 94, both hemispheres 105.8
2245 Female, age 91, both hemispheres 104.8
2250 Female, age 67, right hemisphere 103.1
1933 Female, age 85, both hemispheres 102.7
2018 Male, age 76, both hemispheres 101.6
Perirhinal gyrus
nTPM: 106.0
1847 Female, age 91, left hemisphere 107.5
1794 Male, age 80, right hemisphere 106.9
1841 Female, age 85, right hemisphere 105.9
2848 Male, age 76, right hemisphere 105.5
2521 Female, age 94, right hemisphere 104.0
Subiculum
nTPM: 104.8
2438 Female, age 94, left hemisphere 107.6
2619 Male, age 74, both hemispheres 106.6
1977 Female, age 85, both hemispheres 105.8
1901 Male, age 80, both hemispheres 103.8
2042 Male, age 76, both hemispheres 103.3
2729 Female, age 91, right hemisphere 102.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 69.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.1
Samples: 197

Max nTPM: 169.2
Min nTPM: 36.3
Std nTPM: 18.5
Median nTPM: 68.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 169.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 130.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 125.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 116.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 114.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 112.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 106.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 105.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 103.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 103.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 101.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.9
FF:10153-102I9 76 years, female 27.5
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.2
Samples: 4

Max nTPM: 25.6
Min nTPM: 21.2
Sample A Female 25.6
Sample B Female 25.0
Sample C Male 25.1
Sample D Male 21.2
Entorhinal cortex
nTPM: 23.5
Samples: 4

Max nTPM: 25.5
Min nTPM: 21.5
Sample A Female 25.5
Sample B Female 22.3
Sample C Male 24.7
Sample D Male 21.5
Subiculum
nTPM: 24.5
Samples: 4

Max nTPM: 28.8
Min nTPM: 21.8
Sample A Female 28.8
Sample B Female 22.0
Sample C Male 25.5
Sample D Male 21.8
Ventral hippocampus
nTPM: 25.5
Samples: 4

Max nTPM: 31.2
Min nTPM: 21.3
Sample A Female 24.5
Sample B Female 21.3
Sample C Male 31.2
Sample D Male 25.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 12.8
Min nTPM: 10.6
Sample A Male 12.1
Sample B Male 12.8
Sample C Female 10.6
Sample D Female 12.0
Hippocampal formation
nTPM: 11.7
Samples: 4

Max nTPM: 14.3
Min nTPM: 10.0
Sample A Male 12.1
Sample B Male 14.3
Sample C Female 10.0
Sample D Female 10.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.