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PDE6D
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:43.4 nTPM
HPA:43.4 nTPM
GTEx:42.4 nTPM
FANTOM5:14.3 Scaled Tags Per Million
Pig:28.3 nTPM
Mouse:61.1 nTPM
Allen mouse:10.3 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 43.4
Sample id Sample description nTPM
Amygdala
nTPM: 43.4
2814 Male, age 76, right hemisphere 46.0
2514 Male, age 75, right hemisphere 44.0
1987 Female, age 91, left hemisphere 42.5
2517 Female, age 94, left hemisphere 42.3
2695 Female, age 67, right hemisphere 42.2
Basal amygdala
nTPM: 42.9
2609 Male, age 75, right hemisphere 45.2
1955 Male, age 76, both hemispheres 44.6
2110 Male, age 80, left hemisphere 42.9
2685 Female, age 94, left hemisphere 42.9
2243 Female, age 91, right hemisphere 42.3
2827 Female, age 67, right hemisphere 39.7
Central amygdala
nTPM: 42.8
1905 Male, age 76, both hemispheres 44.6
2515 Male, age 75, right hemisphere 43.9
2239 Male, age 80, left hemisphere 42.8
2701 Female, age 91, right hemisphere 42.1
2826 Female, age 94, left hemisphere 40.7
Corticomedial amygdala
nTPM: 42.8
2428 Male, age 75, right hemisphere 44.9
2240 Male, age 76, both hemispheres 44.7
2242 Female, age 91, right hemisphere 43.5
2829 Male, age 80, left hemisphere 43.2
2429 Female, age 94, left hemisphere 42.1
2535 Female, age 67, right hemisphere 38.5
Lateral amygdala
nTPM: 42.2
1883 Male, age 76, both hemispheres 45.2
2516 Male, age 75, right hemisphere 44.8
2255 Female, age 91, right hemisphere 42.0
2256 Male, age 80, left hemisphere 41.8
2534 Female, age 94, left hemisphere 41.3
2830 Female, age 67, right hemisphere 38.3
Stria terminalis, bed nucleus
nTPM: 41.7
1974 Female, age 91, both hemispheres 42.1
2201 Male, age 74, unknown 42.1
2486 Female, age 94, both hemispheres 40.9

AMYGDALA - GTEx RNA-seqi
Average nTPM 42.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 42.4
Samples: 152

Max nTPM: 94.3
Min nTPM: 25.9
Std nTPM: 10.2
Median nTPM: 40.1
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 94.3
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 84.8
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 82.3
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 75.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 71.0
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 67.7
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 63.7
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 62.3
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 58.9
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 58.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 55.9
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 14.3
FF:10151-102I7 76 years, female 14.3

AMYGDALA - Pig RNA-seqi
Average nTPM 28.3
Pig sample Sample description nTPM
Amygdala
nTPM: 28.3
Samples: 4

Max nTPM: 36.4
Min nTPM: 23.3
Sample A Female 36.4
Sample B Female 29.6
Sample C Male 24.0
Sample D Male 23.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 61.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 61.1
Samples: 4

Max nTPM: 63.5
Min nTPM: 54.8
Sample A Male 54.8
Sample B Male 63.4
Sample C Female 63.5
Sample D Female 62.6

AMYGDALA - Allen Mouse ISHi
Max Expression energy 10.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 10.3
69059804 Antisense, RP_050317_04_A09, Mouse strain C57BL/6J (56 days, male) 10.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.