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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		99.747
RNA expressioni
Consensus:59.9 nTPM
HPA:59.9 nTPM
GTEx:159.2 nTPM
FANTOM5:106.8 Scaled Tags Per Million
Pig:288.5 nTPM
Mouse:594.0 nTPM
Allen mouse:6.4 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA019472
Amygdala mean intensity 99.747
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 16.442
Basal medial amygdaloid nucleus 77.234
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 23.616
Cortical amygdala 71.842
Central amygdala 74.111
Medial amygdaloid nucleus 75.165

AMYGDALA - HPA Brain RNA-seq
Max nTPM 59.9
Sample id Sample description nTPM
Amygdala
nTPM: 29.6
1987 Female, age 91, left hemisphere 115.6
2517 Female, age 94, left hemisphere 14.6
2514 Male, age 75, right hemisphere 11.0
2695 Female, age 67, right hemisphere 4.7
2814 Male, age 76, right hemisphere 2.1
Basal amygdala
nTPM: 16.6
1955 Male, age 76, both hemispheres 23.2
2110 Male, age 80, left hemisphere 21.1
2685 Female, age 94, left hemisphere 18.4
2827 Female, age 67, right hemisphere 13.5
2609 Male, age 75, right hemisphere 11.9
2243 Female, age 91, right hemisphere 11.2
Central amygdala
nTPM: 56.6
2701 Female, age 91, right hemisphere 207.2
2239 Male, age 80, left hemisphere 34.1
2515 Male, age 75, right hemisphere 25.4
2826 Female, age 94, left hemisphere 13.7
1905 Male, age 76, both hemispheres 2.2
Corticomedial amygdala
nTPM: 34.4
2429 Female, age 94, left hemisphere 59.0
2829 Male, age 80, left hemisphere 46.6
2240 Male, age 76, both hemispheres 40.8
2535 Female, age 67, right hemisphere 34.6
2428 Male, age 75, right hemisphere 13.6
2242 Female, age 91, right hemisphere 11.5
Lateral amygdala
nTPM: 26.3
2255 Female, age 91, right hemisphere 91.0
1883 Male, age 76, both hemispheres 16.4
2516 Male, age 75, right hemisphere 14.2
2256 Male, age 80, left hemisphere 13.5
2830 Female, age 67, right hemisphere 12.3
2534 Female, age 94, left hemisphere 10.5
Stria terminalis, bed nucleus
nTPM: 59.9
2201 Male, age 74, unknown 82.1
1974 Female, age 91, both hemispheres 59.7
2486 Female, age 94, both hemispheres 37.8

AMYGDALA - GTEx RNA-seqi
Average nTPM 159.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 159.2
Samples: 152

Max nTPM: 880.7
Min nTPM: 5.1
Std nTPM: 147.9
Median nTPM: 117.0
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 880.7
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 813.5
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 617.6
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 591.4
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 449.6
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 444.0
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 436.1
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 430.9
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 405.3
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 381.3
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 379.8
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 106.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 106.8
FF:10151-102I7 76 years, female 106.8

AMYGDALA - Pig RNA-seqi
Average nTPM 288.5
Pig sample Sample description nTPM
Amygdala
nTPM: 288.5
Samples: 4

Max nTPM: 445.8
Min nTPM: 150.4
Sample A Female 445.8
Sample B Female 150.4
Sample C Male 207.2
Sample D Male 350.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 594.0
Mouse sample Sample description nTPM
Amygdala
nTPM: 594.0
Samples: 4

Max nTPM: 667.1
Min nTPM: 521.3
Sample A Male 616.7
Sample B Male 570.9
Sample C Female 667.1
Sample D Female 521.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 6.4
1001 Antisense, RP_Baylor_103041, Mouse strain C57BL/6J (56 days, male) 6.4
1002 Antisense, RP_Baylor_103041, Mouse strain C57BL/6J (56 days, male) 5.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.