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SSBP3
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:47.7 nTPM
HPA:47.7 nTPM
GTEx:7.0 nTPM
FANTOM5:31.6 Scaled Tags Per Million
Pig:47.9 nTPM
Mouse:70.6 nTPM
Allen mouse:4.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.7
Sample id Sample description nTPM
Hippocampus
nTPM: 21.4
1898 Male, age 80, left hemisphere 29.1
2529 Female, age 94, left hemisphere 25.4
2621 Female, age 67, right hemisphere 22.6
1855 Male, age 76, left hemisphere 22.0
2148 Female, age 91, left hemisphere 16.1
1911 Female, age 85, right hemisphere 13.2
Dentate gyrus
nTPM: 18.1
2530 Female, age 94, left hemisphere 21.0
2246 Female, age 85, both hemispheres 19.8
2531 Female, age 67, both hemispheres 18.6
1927 Female, age 91, both hemispheres 18.4
2010 Male, age 76, both hemispheres 17.8
2528 Male, age 74, both hemispheres 12.9
Entorhinal gyrus
nTPM: 37.5
2764 Male, age 80, right hemisphere 55.4
1938 Female, age 85, left hemisphere 51.0
2613 Female, age 94, left hemisphere 44.5
1787 Male, age 76, left hemisphere 31.9
2686 Male, age 75, right hemisphere 25.4
2117 Female, age 91, right hemisphere 16.9
Hippocampus, CA1
nTPM: 20.0
2749 Male, age 80, left hemisphere 29.2
2045 Male, age 76, both hemispheres 20.4
2082 Female, age 91, right hemisphere 18.7
2527 Male, age 74, both hemispheres 17.8
1873 Female, age 85, both hemispheres 13.6
Hippocampus, CA2
nTPM: 23.1
1892 Male, age 76, both hemispheres 34.1
2437 Female, age 94, left hemisphere 27.7
1940 Female, age 85, left hemisphere 24.2
2113 Female, age 91, right hemisphere 19.1
2249 Male, age 74, both hemispheres 17.2
1963 Male, age 80, left hemisphere 16.0
Hippocampus, CA3
nTPM: 21.8
2137 Male, age 80, left hemisphere 28.5
1867 Male, age 76, both hemispheres 27.7
2861 Female, age 67, both hemispheres 21.0
2620 Female, age 94, left hemisphere 20.0
1891 Female, age 85, both hemispheres 17.7
2436 Male, age 74, both hemispheres 15.8
Parahippocampal cortex
nTPM: 36.1
1850 Male, age 80, both hemispheres 57.1
2532 Female, age 72, left hemisphere 48.8
2245 Female, age 91, both hemispheres 39.7
2693 Female, age 94, both hemispheres 38.8
1933 Female, age 85, both hemispheres 36.2
2622 Female, age 67, right hemisphere 33.7
1990 Female, age 91, right hemisphere 29.1
2018 Male, age 76, both hemispheres 26.4
2692 Male, age 74, both hemispheres 26.4
2250 Female, age 67, right hemisphere 24.8
Perirhinal gyrus
nTPM: 47.7
2848 Male, age 76, right hemisphere 57.8
1794 Male, age 80, right hemisphere 55.6
1847 Female, age 91, left hemisphere 46.0
1841 Female, age 85, right hemisphere 43.7
2521 Female, age 94, right hemisphere 35.5
Subiculum
nTPM: 22.5
2438 Female, age 94, left hemisphere 34.0
1977 Female, age 85, both hemispheres 26.6
1901 Male, age 80, both hemispheres 26.0
2619 Male, age 74, both hemispheres 21.7
2042 Male, age 76, both hemispheres 15.8
2729 Female, age 91, right hemisphere 10.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.0
Samples: 197

Max nTPM: 31.7
Min nTPM: 0.0
Std nTPM: 6.3
Median nTPM: 5.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 31.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 31.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 30.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 28.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 27.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 27.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 22.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 22.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 19.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 19.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 19.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.6
FF:10153-102I9 76 years, female 38.1
FF:10169-103B7 60 years, female 25.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.0
Samples: 4

Max nTPM: 33.7
Min nTPM: 22.1
Sample A Female 30.7
Sample B Female 29.5
Sample C Male 33.7
Sample D Male 22.1
Entorhinal cortex
nTPM: 47.9
Samples: 4

Max nTPM: 49.8
Min nTPM: 45.1
Sample A Female 49.8
Sample B Female 45.1
Sample C Male 49.4
Sample D Male 47.2
Subiculum
nTPM: 39.3
Samples: 4

Max nTPM: 55.3
Min nTPM: 28.6
Sample A Female 55.3
Sample B Female 34.0
Sample C Male 39.2
Sample D Male 28.6
Ventral hippocampus
nTPM: 34.0
Samples: 4

Max nTPM: 45.4
Min nTPM: 23.6
Sample A Female 34.6
Sample B Female 23.6
Sample C Male 45.4
Sample D Male 32.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.6
Samples: 4

Max nTPM: 76.7
Min nTPM: 67.5
Sample A Male 67.5
Sample B Male 69.8
Sample C Female 68.2
Sample D Female 76.7
Hippocampal formation
nTPM: 57.6
Samples: 4

Max nTPM: 59.8
Min nTPM: 54.4
Sample A Male 59.3
Sample B Male 57.0
Sample C Female 54.4
Sample D Female 59.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.5
74635614 Antisense, RP_060215_04_B01, Mouse strain C57BL/6J (56 days, male) 4.5

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The Human Protein Atlas

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