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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.3 nTPM
HPA:21.3 nTPM
GTEx:14.0 nTPM
FANTOM5:24.5 Scaled Tags Per Million
Pig:7.4 nTPM
Mouse:6.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.3
Sample id Sample description nTPM
Hippocampus
nTPM: 21.3
2148 Female, age 91, left hemisphere 23.0
1855 Male, age 76, left hemisphere 22.3
2529 Female, age 94, left hemisphere 22.2
2621 Female, age 67, right hemisphere 20.4
1911 Female, age 85, right hemisphere 20.3
1898 Male, age 80, left hemisphere 19.8
Dentate gyrus
nTPM: 19.4
2528 Male, age 74, both hemispheres 21.8
2246 Female, age 85, both hemispheres 21.5
2530 Female, age 94, left hemisphere 20.0
2010 Male, age 76, both hemispheres 18.1
2531 Female, age 67, both hemispheres 18.0
1927 Female, age 91, both hemispheres 17.2
Entorhinal gyrus
nTPM: 20.2
2117 Female, age 91, right hemisphere 25.4
2686 Male, age 75, right hemisphere 20.8
1938 Female, age 85, left hemisphere 19.6
2613 Female, age 94, left hemisphere 19.2
1787 Male, age 76, left hemisphere 18.5
2764 Male, age 80, right hemisphere 17.7
Hippocampus, CA1
nTPM: 18.5
2527 Male, age 74, both hemispheres 22.9
1873 Female, age 85, both hemispheres 20.2
2082 Female, age 91, right hemisphere 17.5
2045 Male, age 76, both hemispheres 17.4
2749 Male, age 80, left hemisphere 14.4
Hippocampus, CA2
nTPM: 19.2
1940 Female, age 85, left hemisphere 22.5
1963 Male, age 80, left hemisphere 20.8
2437 Female, age 94, left hemisphere 18.6
2249 Male, age 74, both hemispheres 18.4
2113 Female, age 91, right hemisphere 18.3
1892 Male, age 76, both hemispheres 16.7
Hippocampus, CA3
nTPM: 18.6
2861 Female, age 67, both hemispheres 26.9
1891 Female, age 85, both hemispheres 20.3
2620 Female, age 94, left hemisphere 18.3
2436 Male, age 74, both hemispheres 16.6
1867 Male, age 76, both hemispheres 16.2
2137 Male, age 80, left hemisphere 13.5
Parahippocampal cortex
nTPM: 19.5
2692 Male, age 74, both hemispheres 24.2
2622 Female, age 67, right hemisphere 23.7
1933 Female, age 85, both hemispheres 20.9
2250 Female, age 67, right hemisphere 20.0
2018 Male, age 76, both hemispheres 19.7
2245 Female, age 91, both hemispheres 18.3
2693 Female, age 94, both hemispheres 18.0
1990 Female, age 91, right hemisphere 17.3
2532 Female, age 72, left hemisphere 16.8
1850 Male, age 80, both hemispheres 16.3
Perirhinal gyrus
nTPM: 17.0
2521 Female, age 94, right hemisphere 17.7
1847 Female, age 91, left hemisphere 17.2
1794 Male, age 80, right hemisphere 17.1
2848 Male, age 76, right hemisphere 16.5
1841 Female, age 85, right hemisphere 16.4
Subiculum
nTPM: 19.5
2729 Female, age 91, right hemisphere 24.4
2619 Male, age 74, both hemispheres 22.9
1977 Female, age 85, both hemispheres 18.6
2042 Male, age 76, both hemispheres 18.1
2438 Female, age 94, left hemisphere 17.5
1901 Male, age 80, both hemispheres 15.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.0
Samples: 197

Max nTPM: 44.3
Min nTPM: 2.7
Std nTPM: 6.3
Median nTPM: 12.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 44.3
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 40.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 38.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 30.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 30.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 29.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 29.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 28.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 28.2
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 26.6
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 26.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.5
FF:10153-102I9 76 years, female 34.5
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.4
Samples: 4

Max nTPM: 5.9
Min nTPM: 4.8
Sample A Female 5.9
Sample B Female 5.3
Sample C Male 5.7
Sample D Male 4.8
Entorhinal cortex
nTPM: 5.4
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.6
Sample A Female 5.2
Sample B Female 5.3
Sample C Male 6.5
Sample D Male 4.6
Subiculum
nTPM: 7.4
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.6
Sample A Female 8.1
Sample B Female 6.6
Sample C Male 7.8
Sample D Male 7.0
Ventral hippocampus
nTPM: 6.8
Samples: 4

Max nTPM: 9.2
Min nTPM: 5.3
Sample A Female 6.5
Sample B Female 5.3
Sample C Male 9.2
Sample D Male 6.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.2
Samples: 4

Max nTPM: 6.9
Min nTPM: 5.4
Sample A Male 6.9
Sample B Male 6.5
Sample C Female 5.8
Sample D Female 5.4
Hippocampal formation
nTPM: 6.0
Samples: 4

Max nTPM: 6.4
Min nTPM: 5.4
Sample A Male 6.4
Sample B Male 6.0
Sample C Female 5.4
Sample D Female 6.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69672952 Antisense, RP_050428_04_H03, Mouse strain C57BL/6J (56 days, male) 0.0

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