Brain tissue expression of RER1 in retina

RETINA - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

Consensus:	73.8	nTPM
GTEx:	73.8	nTPM
FANTOM5:	85.2	Scaled Tags Per Million

Pig:	20.7	nTPM
Mouse:	128.5	nTPM

RETINA - GTEx RNA-seqⁱ

Average nTPM	73.8

GTEx sample id

Sample description

nTPM

Retina
Average nTPM: 73.8

Samples: 105

Max nTPM: 95.7
Min nTPM: 40.8
Std nTPM: 9.9
Median nTPM:

153_1	70 years, female	95.7
251_1	78 years, male	93.0
266_1	85 years, male	93.0
189_1	76 years, male	90.9
377_1	82 years, female	90.0
394_1	75 years, female	89.8
526_1	61 years, male	88.6
389_1	86 years, female	88.1
308_1	70 years, female	87.9
499_1	55 years, female	87.7
468_1	89 years, male	87.4
246_1	77 years, male	86.7
324_1	76 years, male	86.2
162_1	79 years, female	86.1
229_1	69 years, female	85.5
406_1	79 years, male	84.6
126_1	63 years, male	84.5
404_1	82 years, female	84.5
384_1	83 years, male	84.0
495_1	57 years, female	82.9
518_1	75 years, female	82.1
322_1	76 years, male	81.6
315_1	62 years, female	81.2
414_1	84 years, female	81.0
265_1	87 years, male	80.6
415_1	77 years, female	80.4
347_1	72 years, male	79.5
405_1	91 years, male	79.4
396_1	62 years, male	79.1
517_1	88 years, male	78.8
335_1	73 years, female	78.6
317_1	60 years, male	78.4
115_1	83 years, male	78.3
503_1	68 years, male	78.3
321_1	62 years, female	78.1
292_1	71 years, male	77.8
217_1	76 years, male	77.7
17_1	71 years, male	77.5
425_1	59 years, female	77.5
286_1	68 years, female	77.4
139_1	64 years, female	77.1
237_1	82 years, male	76.8
109_1	81 years, female	76.3
320_1	89 years, female	75.7
376_1	75 years, female	75.7
480_1	63 years, male	75.7
18_1	88 years, male	75.5
35_1	74 years, female	75.5
172_1	72 years, female	75.2
355_1	70 years, female	75.2
466_1	57 years, female	74.9
137_1	83 years, male	74.8
311_1	78 years, male	74.7
447_1	81 years, male	74.7
291_1	76 years, male	74.6
42_1	85 years, male	73.9
89_1	63 years, male	73.7
316_1	62 years, male	73.2
218_1	71 years, female	73.0
307_1	66 years, female	72.4
353_1	82 years, female	72.4
149_1	88 years, male	72.2
352_1	62 years, male	71.9
9_1	66 years, female	71.8
318_1	68 years, male	71.7
350_1	84 years, female	71.7
349_1	83 years, male	71.2
145_1	84 years, male	71.0
177_1	74 years, male	70.6
254_1	77 years, female	69.8
313_1	79 years, female	69.7
142_1	61 years, female	69.6
163_1	78 years, male	69.1
348_1	84 years, male	68.6
4_1	88 years, female	68.5
375_1	74 years, female	68.3
293_1	68 years, female	68.1
2_1	77 years, female	68.0
264_1	73 years, female	67.9
99_1	64 years, male	67.8
413_1	59 years, female	67.4
120_1	70 years, female	66.2
501_1	88 years, male	66.0
32_1	67 years, male	65.6
314_1	67 years, male	65.6
173_1	67 years, male	65.1
6_1	73 years, female	64.2
354_1	81 years, female	64.1
81_1	67 years, male	63.5
41_1	94 years, female	63.4
351_1	91 years, male	63.3
295_1	61 years, female	62.6
319_1	81 years, male	62.1
288_1	66 years, female	62.0
243_1	75 years, male	61.5
117_1	61 years, male	61.1
379_1	60 years, male	60.1
386_1	76 years, male	60.0
506_1	65 years, male	58.7
356_1	87 years, female	56.8
452_1	88 years, female	55.6
490_1	67 years, female	53.9
43_1	64 years, female	53.5
119_1	70 years, female	51.2
491_1	89 years, female	40.8
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RETINA - FANTOM5 CAGEⁱ

Max Scaled Tags Per Million	85.2

FANTOM5 sample id

Sample description

Scaled Tags Per Million

Retina
Scaled Tags Per Million: 85.2

FF:10030-101E3

24-65 years, mixed

85.2

RETINA - Pig RNA-seqⁱ

Average nTPM	20.7

Pig sample

Sample description

nTPM

Retina
nTPM: 20.7

Samples: 4

Max nTPM: 24.5
Min nTPM: 18.6

Sample A	Female	18.6
Sample B	Female	24.5
Sample C	Male	20.9
Sample D	Male	18.8

RETINA - Mouse RNA-seqⁱ

Average nTPM	128.5

Mouse sample

Sample description

nTPM

Retina
nTPM: 128.6

Samples: 4

Max nTPM: 154.8
Min nTPM: 111.8

Sample A	Male	135.2
Sample B	Male	111.8
Sample C	Female	154.8
Sample D	Female	112.5