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TPRG1L
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:84.6 nTPM
HPA:84.6 nTPM
GTEx:86.3 nTPM
FANTOM5:121.7 Scaled Tags Per Million
Pig:78.4 nTPM
Mouse:186.1 nTPM
Allen mouse:11.6 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 84.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 72.4
1857 Female, age 85, left hemisphere 79.3
2290 Female, age 72, unknown 77.6
2846 Female, age 79, unknown 77.3
1781 Male, age 74, unknown 75.2
2288 Male, age 75, left hemisphere 70.9
1854 Male, age 80, left hemisphere 70.4
2289 Male, age 61, right hemisphere 64.7
2481 Female, age 94, left hemisphere 63.8
Claustrum
nTPM: 77.5
2198 Male, age 80, both hemispheres 84.3
2491 Male, age 75, both hemispheres 83.0
2284 Female, age 91, both hemispheres 82.8
2568 Male, age 61, both hemispheres 82.8
2645 Female, age 72, unknown 81.0
2392 Female, age 94, both hemispheres 75.0
1956 Male, age 74, unknown 73.3
2196 Female, age 79, unknown 70.4
2292 Female, age 85, both hemispheres 65.1
Globus pallidus, externus
nTPM: 57.3
2772 Female, age 79, unknown 61.6
2646 Male, age 61, right hemisphere 59.0
2395 Male, age 75, both hemispheres 58.7
2567 Female, age 72, unknown 54.3
1996 Male, age 80, right hemisphere 53.0
Globus pallidus, internus
nTPM: 56.9
2483 Female, age 94, right hemisphere 67.6
2287 Male, age 75, right hemisphere 62.4
1818 Male, age 74, unknown 58.9
2037 Male, age 80, right hemisphere 53.7
2566 Female, age 72, unknown 53.6
2778 Female, age 91, both hemispheres 53.4
2111 Female, age 85, right hemisphere 48.5
Nucleus accumbens
nTPM: 71.8
1856 Female, age 91, right hemisphere 85.3
1783 Male, age 74, unknown 81.7
2824 Male, age 61, right hemisphere 77.2
1806 Female, age 85, left hemisphere 74.8
2286 Male, age 75, left hemisphere 72.5
2698 Female, age 72, unknown 67.6
2391 Female, age 94, left hemisphere 58.4
2732 Male, age 80, right hemisphere 57.1
Nucleus basalis of Meynert
nTPM: 64.4
2484 Female, age 94, left hemisphere 68.6
2393 Male, age 80, right hemisphere 65.9
2821 Male, age 75, both hemispheres 62.7
2569 Male, age 61, both hemispheres 60.3
Nucleus of the diagonal band
nTPM: 84.1
2775 Male, age 80, right hemisphere 94.7
1812 Female, age 91, both hemispheres 87.2
2029 Male, age 61, right hemisphere 86.7
2195 Female, age 85, both hemispheres 84.9
1979 Male, age 74, unknown 66.8
Olfactory tubercle
nTPM: 84.6
1998 Female, age 91, both hemispheres 90.1
2487 Female, age 94, left hemisphere 86.4
1846 Male, age 80, right hemisphere 83.7
2856 Male, age 75, right hemisphere 78.1
Putamen
nTPM: 72.8
2466 Female, age 79, unknown 78.6
1937 Female, age 91, right hemisphere 77.8
1838 Male, age 80, right hemisphere 75.1
1829 Male, age 74, unknown 72.2
2647 Male, age 75, left hemisphere 71.9
2489 Female, age 72, unknown 68.2
2482 Female, age 94, left hemisphere 65.8
Septal nuclei
nTPM: 77.2
1960 Male, age 74, unknown 97.8
2031 Female, age 72, unknown 89.7
2009 Female, age 91, both hemispheres 80.3
2629 Female, age 94, right hemisphere 77.1
2059 Female, age 85, both hemispheres 72.2
2394 Male, age 61, left hemisphere 66.6
2199 Male, age 80, right hemisphere 56.8

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 86.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 71.9
Samples: 246

Max nTPM: 139.5
Min nTPM: 34.7
Std nTPM: 23.6
Median nTPM: 69.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 139.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 132.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 129.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 126.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 126.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 121.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 121.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 121.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 120.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 119.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 117.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 86.3
Samples: 246

Max nTPM: 156.6
Min nTPM: 25.4
Std nTPM: 25.5
Median nTPM: 89.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 156.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 145.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 144.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 138.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 138.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 137.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 137.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 136.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 134.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 132.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 130.9
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Brain - Putamen (basal ganglia)
Average nTPM: 70.1
Samples: 205

Max nTPM: 132.0
Min nTPM: 31.1
Std nTPM: 22.8
Median nTPM: 66.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 132.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 130.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 130.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 130.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 126.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 122.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 117.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 116.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 116.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 115.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 115.2
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 121.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 82.6
FF:10164-103B2 76 years, female 82.6
Globus pallidus
Scaled Tags Per Million: 30.9
FF:10175-103C4 60 years, female 31.5
FF:10161-103A8 76 years, female 30.3
Nucleus accumbens
Scaled Tags Per Million: 101.9
FF:10037-101F1 23-56 years, mixed 101.9
Putamen
Scaled Tags Per Million: 121.7
FF:10176-103C5 60 years, female 121.7

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 78.4
Pig sample Sample description nTPM
Caudate
nTPM: 78.4
Samples: 4

Max nTPM: 94.4
Min nTPM: 63.5
Sample A Female 63.5
Sample B Female 87.3
Sample C Male 94.4
Sample D Male 68.5
Putamen
nTPM: 76.2
Samples: 4

Max nTPM: 102.4
Min nTPM: 59.9
Sample A Female 59.9
Sample B Female 65.0
Sample C Male 102.4
Sample D Male 77.5
Septum
nTPM: 68.5
Samples: 4

Max nTPM: 76.4
Min nTPM: 64.0
Sample A Female 66.5
Sample B Female 64.0
Sample C Male 76.4
Sample D Male 67.1
Ventral pallidum
nTPM: 64.4
Samples: 4

Max nTPM: 70.2
Min nTPM: 57.9
Sample A Female 62.9
Sample B Female 66.7
Sample C Male 70.2
Sample D Male 57.9

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 186.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 178.5
Samples: 4

Max nTPM: 187.6
Min nTPM: 166.1
Sample A Male 181.2
Sample B Male 187.6
Sample C Female 166.1
Sample D Female 179.0
Septum
nTPM: 186.1
Samples: 4

Max nTPM: 193.7
Min nTPM: 178.3
Sample A Male 178.3
Sample B Male 193.7
Sample C Female 183.9
Sample D Female 188.4
Ventral forebrain
nTPM: 143.7
Samples: 4

Max nTPM: 154.4
Min nTPM: 133.5
Sample A Male 133.5
Sample B Male 144.6
Sample C Female 154.4
Sample D Female 142.4

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 11.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.6
69080068 Antisense, RP_050324_01_H07, Mouse strain C57BL/6J (56 days, male) 11.6
Pallidum
Expression energy: 9.8
69080068 Antisense, RP_050324_01_H07, Mouse strain C57BL/6J (56 days, male) 9.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.