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TPRG1L
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:74.7 nTPM
HPA:74.7 nTPM
GTEx:52.7 nTPM
FANTOM5:28.4 Scaled Tags Per Million
Pig:68.4 nTPM
Mouse:166.6 nTPM
Allen mouse:12.0 Expression energy

MIDBRAIN - Annotated protein expression
Pending normal tissue analysis

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 74.7
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 67.4
2586 Male, age 75, left hemisphere 76.3
2666 Male, age 74, left hemisphere 75.2
2019 Male, age 18, unknown 71.3
1827 Male, age 72, unknown 70.5
2411 Female, age 72, unknown 66.9
2828 Female, age 72, unknown 65.1
1870 Female, age 42, unknown 64.3
2219 Male, age 76, both hemispheres 64.1
1833 Male, age 53, unknown 60.8
1830 Male, age 51, unknown 59.5
Dorsal raphe nucleus
nTPM: 69.7
2298 Female, age 72, unknown 78.3
2047 Male, age 72, unknown 75.2
2750 Male, age 76, both hemispheres 69.4
1828 Male, age 53, unknown 66.2
2016 Female, age 72, unknown 59.0
Inferior colliculus
nTPM: 64.5
2097 Female, age 72, unknown 68.0
1848 Female, age 42, unknown 64.7
2849 Male, age 72, unknown 63.7
1890 Male, age 53, unknown 61.5
Median raphe nucleus
nTPM: 74.7
2220 Male, age 76, midline 74.7
Pedunculopontine tegmental nucleus
nTPM: 65.1
2334 Male, age 80, both hemispheres 70.5
1921 Female, age 85, both hemispheres 68.5
2338 Male, age 61, both hemispheres 56.3
Periaquaductal grey, anterior
nTPM: 71.6
2502 Female, age 75, unknown 76.3
1795 Male, age 51, unknown 71.6
1947 Male, age 18, unknown 66.9
Periaquaductal grey, dorsal
nTPM: 63.6
1840 Male, age 53, unknown 69.1
2464 Female, age 72, unknown 63.8
2850 Male, age 76, both hemispheres 61.2
1831 Male, age 72, unknown 60.1
Periaquaductal grey, lateral
nTPM: 59.4
2053 Male, age 18, unknown 61.5
2140 Male, age 76, both hemispheres 59.1
2272 Male, age 74, both hemispheres 57.6
Pretectal area
nTPM: 68.9
1816 Male, age 51, unknown 82.1
2007 Male, age 72, unknown 78.7
1944 Female, age 72, unknown 78.0
1817 Female, age 42, unknown 77.9
1815 Male, age 53, unknown 71.0
2224 Female, age 72, unknown 67.0
2667 Female, age 75, unknown 64.6
2825 Male, age 18, unknown 64.6
2407 Male, age 75, both hemispheres 59.9
2273 Male, age 74, both hemispheres 57.3
2316 Male, age 76, right hemisphere 56.8
Red nucleus
nTPM: 61.1
2584 Male, age 75, left hemisphere 68.0
2785 Male, age 18, unknown 67.8
1821 Female, age 72, unknown 64.6
1954 Female, age 42, unknown 61.1
2227 Male, age 72, unknown 60.2
2769 Male, age 72, unknown 60.2
2725 Female, age 75, unknown 59.9
2588 Male, age 74, left hemisphere 59.8
2503 Female, age 72, unknown 59.6
1865 Male, age 51, unknown 58.0
1904 Male, age 53, unknown 57.8
2823 Male, age 76, right hemisphere 55.7
Substantia nigra
nTPM: 70.9
2665 Male, age 74, both hemispheres 79.1
1941 Male, age 53, unknown 78.0
1916 Female, age 42, unknown 76.8
1889 Female, age 72, unknown 75.0
1851 Male, age 51, unknown 74.4
2241 Male, age 72, unknown 72.0
2409 Female, age 72, unknown 65.3
2583 Male, age 75, right hemisphere 64.4
2590 Female, age 75, unknown 62.9
2699 Male, age 18, unknown 60.7
Superior colliculus
nTPM: 66.6
2668 Female, age 75, unknown 74.4
2087 Female, age 72, unknown 73.6
2664 Male, age 75, both hemispheres 73.3
1796 Male, age 53, unknown 70.8
2261 Male, age 18, unknown 69.5
1895 Male, age 76, right hemisphere 66.0
1839 Male, age 51, unknown 65.2
2587 Male, age 74, left hemisphere 61.1
1913 Female, age 42, unknown 57.1
1995 Male, age 72, unknown 55.0
Ventral tegmental area
nTPM: 68.3
2410 Female, age 72, unknown 73.8
2218 Male, age 76, both hemispheres 70.8
1915 Female, age 42, unknown 70.2
1942 Male, age 51, unknown 65.5
2021 Male, age 53, unknown 65.1
2223 Female, age 72, unknown 64.7

MIDBRAIN - GTEx RNA-seqi
Average nTPM 52.7
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 52.7
Samples: 139

Max nTPM: 159.6
Min nTPM: 23.0
Std nTPM: 23.6
Median nTPM: 47.4
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 159.6
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 137.6
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 125.6
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 116.3
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 113.1
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 107.8
GTEX-1399T-0011-R2b-SM-5DUXM 60-69 years, male 93.7
GTEX-1HB9E-0011-R2b-SM-A96RW 50-59 years, male 85.9
GTEX-1HT8W-0011-R2a-SM-CMKH9 30-39 years, male 84.7
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 83.1
GTEX-11DZ1-0011-R2a-SM-DNZZM 50-59 years, male 83.1
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 28.4
FF:10158-103A5 76 years, female 28.4

MIDBRAIN - Pig RNA-seqi
Average nTPM 68.4
Pig sample Sample description nTPM
Midbrain
nTPM: 66.8
Samples: 4

Max nTPM: 72.2
Min nTPM: 63.7
Sample A Female 72.2
Sample B Female 66.6
Sample C Male 64.5
Sample D Male 63.7
Periaqueductal gray
nTPM: 62.2
Samples: 3

Max nTPM: 74.9
Min nTPM: 52.5
Sample B Female 59.1
Sample C Male 74.9
Sample D Male 52.5
Substantia nigra
nTPM: 67.6
Samples: 4

Max nTPM: 97.1
Min nTPM: 44.9
Sample A Female 97.1
Sample B Female 52.4
Sample C Male 75.8
Sample D Male 44.9
Superior colliculi
nTPM: 68.4
Samples: 4

Max nTPM: 90.7
Min nTPM: 48.6
Sample A Female 90.7
Sample B Female 48.6
Sample C Male 72.2
Sample D Male 62.2

MIDBRAIN - Mouse RNA-seqi
Average nTPM 166.6
Mouse sample Sample description nTPM
Midbrain
nTPM: 166.6
Samples: 4

Max nTPM: 170.6
Min nTPM: 159.4
Sample A Male 170.6
Sample B Male 167.4
Sample C Female 159.4
Sample D Female 168.9

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 12.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 12.0
69080068 Antisense, RP_050324_01_H07, Mouse strain C57BL/6J (56 days, male) 12.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.