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SV2A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:65.1 nTPM
HPA:65.1 nTPM
GTEx:65.0 nTPM
FANTOM5:107.0 Scaled Tags Per Million
Pig:109.6 nTPM
Mouse:200.1 nTPM
Allen mouse:18.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007863Antibody CAB002226
Glial cells Not detectedNot detected
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 65.1
Sample id Sample description nTPM
Hippocampus
nTPM: 27.6
1898 Male, age 80, left hemisphere 48.1
1855 Male, age 76, left hemisphere 33.7
2621 Female, age 67, right hemisphere 31.5
2148 Female, age 91, left hemisphere 26.0
1911 Female, age 85, right hemisphere 16.8
2529 Female, age 94, left hemisphere 9.3
Dentate gyrus
nTPM: 35.0
1927 Female, age 91, both hemispheres 56.2
2530 Female, age 94, left hemisphere 36.9
2010 Male, age 76, both hemispheres 34.6
2246 Female, age 85, both hemispheres 29.5
2528 Male, age 74, both hemispheres 26.9
2531 Female, age 67, both hemispheres 26.2
Entorhinal gyrus
nTPM: 40.0
2613 Female, age 94, left hemisphere 63.5
2764 Male, age 80, right hemisphere 54.1
1938 Female, age 85, left hemisphere 40.5
1787 Male, age 76, left hemisphere 39.2
2686 Male, age 75, right hemisphere 30.4
2117 Female, age 91, right hemisphere 12.4
Hippocampus, CA1
nTPM: 38.0
2749 Male, age 80, left hemisphere 71.7
1873 Female, age 85, both hemispheres 39.3
2045 Male, age 76, both hemispheres 37.3
2527 Male, age 74, both hemispheres 22.8
2082 Female, age 91, right hemisphere 19.0
Hippocampus, CA2
nTPM: 34.6
1892 Male, age 76, both hemispheres 63.5
1963 Male, age 80, left hemisphere 45.9
2437 Female, age 94, left hemisphere 42.4
1940 Female, age 85, left hemisphere 23.3
2113 Female, age 91, right hemisphere 17.6
2249 Male, age 74, both hemispheres 15.0
Hippocampus, CA3
nTPM: 34.1
2620 Female, age 94, left hemisphere 47.9
2137 Male, age 80, left hemisphere 45.0
1867 Male, age 76, both hemispheres 42.2
2861 Female, age 67, both hemispheres 28.4
1891 Female, age 85, both hemispheres 24.0
2436 Male, age 74, both hemispheres 17.3
Parahippocampal cortex
nTPM: 42.7
2693 Female, age 94, both hemispheres 63.8
1850 Male, age 80, both hemispheres 54.7
2245 Female, age 91, both hemispheres 47.5
1990 Female, age 91, right hemisphere 46.9
2250 Female, age 67, right hemisphere 44.4
1933 Female, age 85, both hemispheres 43.7
2532 Female, age 72, left hemisphere 38.5
2622 Female, age 67, right hemisphere 37.3
2018 Male, age 76, both hemispheres 25.9
2692 Male, age 74, both hemispheres 24.2
Perirhinal gyrus
nTPM: 65.1
1847 Female, age 91, left hemisphere 81.1
2521 Female, age 94, right hemisphere 79.0
1794 Male, age 80, right hemisphere 66.3
1841 Female, age 85, right hemisphere 52.0
2848 Male, age 76, right hemisphere 47.0
Subiculum
nTPM: 26.4
1977 Female, age 85, both hemispheres 40.0
1901 Male, age 80, both hemispheres 31.1
2438 Female, age 94, left hemisphere 31.1
2619 Male, age 74, both hemispheres 30.8
2042 Male, age 76, both hemispheres 13.2
2729 Female, age 91, right hemisphere 12.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.0
Samples: 197

Max nTPM: 180.3
Min nTPM: 7.5
Std nTPM: 35.3
Median nTPM: 60.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 180.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 156.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 155.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 153.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 139.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 135.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 132.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 131.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 131.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 127.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 121.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 107.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 107.0
FF:10169-103B7 60 years, female 129.7
FF:10153-102I9 76 years, female 84.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 109.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 92.1
Samples: 4

Max nTPM: 106.0
Min nTPM: 65.7
Sample A Female 106.0
Sample B Female 100.9
Sample C Male 95.6
Sample D Male 65.7
Entorhinal cortex
nTPM: 109.7
Samples: 4

Max nTPM: 119.7
Min nTPM: 102.2
Sample A Female 119.7
Sample B Female 102.2
Sample C Male 106.6
Sample D Male 110.1
Subiculum
nTPM: 104.6
Samples: 4

Max nTPM: 136.8
Min nTPM: 86.6
Sample A Female 136.8
Sample B Female 87.6
Sample C Male 107.5
Sample D Male 86.6
Ventral hippocampus
nTPM: 98.8
Samples: 4

Max nTPM: 138.7
Min nTPM: 66.9
Sample A Female 104.9
Sample B Female 66.9
Sample C Male 138.7
Sample D Male 84.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 200.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 200.1
Samples: 4

Max nTPM: 262.6
Min nTPM: 174.7
Sample A Male 185.4
Sample B Male 177.6
Sample C Female 174.7
Sample D Female 262.6
Hippocampal formation
nTPM: 173.1
Samples: 4

Max nTPM: 209.9
Min nTPM: 139.7
Sample A Male 139.7
Sample B Male 183.9
Sample C Female 209.9
Sample D Female 159.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.2
69012765 Antisense, RP_050309_01_D10, Mouse strain C57BL/6J (56 days, male) 18.2

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