ABOUTMENU
HELP
NEWS
EFCAB14
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:21.3 nTPM
HPA:21.3 nTPM
GTEx:34.3 nTPM
FANTOM5:59.4 Scaled Tags Per Million
Pig:25.7 nTPM
Mouse:31.8 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011224Antibody HPA011938
Glial cells MediumLow
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.3
Sample id Sample description nTPM
Hippocampus
nTPM: 19.7
2529 Female, age 94, left hemisphere 23.2
1898 Male, age 80, left hemisphere 21.5
1855 Male, age 76, left hemisphere 19.1
1911 Female, age 85, right hemisphere 18.6
2148 Female, age 91, left hemisphere 18.3
2621 Female, age 67, right hemisphere 17.6
Dentate gyrus
nTPM: 17.1
2530 Female, age 94, left hemisphere 21.7
2528 Male, age 74, both hemispheres 19.4
2010 Male, age 76, both hemispheres 19.3
2246 Female, age 85, both hemispheres 16.5
2531 Female, age 67, both hemispheres 12.9
1927 Female, age 91, both hemispheres 12.5
Entorhinal gyrus
nTPM: 18.3
2117 Female, age 91, right hemisphere 28.5
1787 Male, age 76, left hemisphere 18.7
2686 Male, age 75, right hemisphere 17.6
1938 Female, age 85, left hemisphere 17.5
2764 Male, age 80, right hemisphere 15.0
2613 Female, age 94, left hemisphere 12.3
Hippocampus, CA1
nTPM: 16.1
2527 Male, age 74, both hemispheres 20.0
1873 Female, age 85, both hemispheres 17.9
2082 Female, age 91, right hemisphere 16.1
2749 Male, age 80, left hemisphere 15.6
2045 Male, age 76, both hemispheres 10.8
Hippocampus, CA2
nTPM: 17.9
1963 Male, age 80, left hemisphere 20.6
2249 Male, age 74, both hemispheres 18.7
2113 Female, age 91, right hemisphere 18.6
1940 Female, age 85, left hemisphere 18.1
2437 Female, age 94, left hemisphere 17.3
1892 Male, age 76, both hemispheres 14.2
Hippocampus, CA3
nTPM: 15.4
1891 Female, age 85, both hemispheres 21.8
1867 Male, age 76, both hemispheres 16.6
2436 Male, age 74, both hemispheres 14.8
2861 Female, age 67, both hemispheres 14.6
2137 Male, age 80, left hemisphere 13.0
2620 Female, age 94, left hemisphere 11.7
Parahippocampal cortex
nTPM: 15.0
2692 Male, age 74, both hemispheres 21.9
2018 Male, age 76, both hemispheres 17.3
1990 Female, age 91, right hemisphere 16.9
2245 Female, age 91, both hemispheres 15.9
2250 Female, age 67, right hemisphere 14.9
2622 Female, age 67, right hemisphere 13.6
1850 Male, age 80, both hemispheres 13.5
1933 Female, age 85, both hemispheres 13.2
2532 Female, age 72, left hemisphere 12.2
2693 Female, age 94, both hemispheres 10.6
Perirhinal gyrus
nTPM: 12.3
1794 Male, age 80, right hemisphere 14.1
1847 Female, age 91, left hemisphere 13.4
2521 Female, age 94, right hemisphere 13.3
2848 Male, age 76, right hemisphere 11.1
1841 Female, age 85, right hemisphere 9.7
Subiculum
nTPM: 21.3
2042 Male, age 76, both hemispheres 23.9
2619 Male, age 74, both hemispheres 21.7
2438 Female, age 94, left hemisphere 21.5
2729 Female, age 91, right hemisphere 20.8
1901 Male, age 80, both hemispheres 20.6
1977 Female, age 85, both hemispheres 19.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.3
Samples: 197

Max nTPM: 71.3
Min nTPM: 15.8
Std nTPM: 10.0
Median nTPM: 32.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 71.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 62.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 59.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 59.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 58.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 58.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 55.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 55.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 53.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 52.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 51.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.4
FF:10153-102I9 76 years, female 85.3
FF:10169-103B7 60 years, female 33.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 31.3
Min nTPM: 17.1
Sample A Female 31.3
Sample B Female 23.3
Sample C Male 31.2
Sample D Male 17.1
Entorhinal cortex
nTPM: 19.1
Samples: 4

Max nTPM: 21.4
Min nTPM: 16.0
Sample A Female 18.1
Sample B Female 21.4
Sample C Male 20.7
Sample D Male 16.0
Subiculum
nTPM: 21.3
Samples: 4

Max nTPM: 23.5
Min nTPM: 19.7
Sample A Female 23.5
Sample B Female 21.8
Sample C Male 19.7
Sample D Male 20.1
Ventral hippocampus
nTPM: 22.8
Samples: 4

Max nTPM: 26.3
Min nTPM: 18.8
Sample A Female 24.4
Sample B Female 18.8
Sample C Male 26.3
Sample D Male 21.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.2
Samples: 4

Max nTPM: 34.0
Min nTPM: 27.9
Sample A Male 34.0
Sample B Male 29.8
Sample C Female 27.9
Sample D Female 29.0
Hippocampal formation
nTPM: 31.8
Samples: 4

Max nTPM: 37.5
Min nTPM: 28.0
Sample A Male 28.0
Sample B Male 32.3
Sample C Female 37.5
Sample D Female 29.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
68844731 Antisense, RP_050222_02_C09, Mouse strain C57BL/6J (56 days, male) 5.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.