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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:37.7 nTPM
HPA:37.7 nTPM
GTEx:38.3 nTPM
FANTOM5:5.1 Scaled Tags Per Million
Mouse:100.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044833Antibody HPA052083
Glial cells Not detectedMedium
Neuronal cells MediumHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.7
Sample id Sample description nTPM
Hippocampus
nTPM: 36.2
1898 Male, age 80, left hemisphere 41.4
2621 Female, age 67, right hemisphere 40.0
2529 Female, age 94, left hemisphere 35.9
1855 Male, age 76, left hemisphere 34.5
2148 Female, age 91, left hemisphere 33.3
1911 Female, age 85, right hemisphere 32.0
Dentate gyrus
nTPM: 37.7
2246 Female, age 85, both hemispheres 39.3
2531 Female, age 67, both hemispheres 39.0
1927 Female, age 91, both hemispheres 38.6
2010 Male, age 76, both hemispheres 37.2
2530 Female, age 94, left hemisphere 36.5
2528 Male, age 74, both hemispheres 35.5
Entorhinal gyrus
nTPM: 34.6
1938 Female, age 85, left hemisphere 36.1
1787 Male, age 76, left hemisphere 35.7
2613 Female, age 94, left hemisphere 35.0
2764 Male, age 80, right hemisphere 34.9
2117 Female, age 91, right hemisphere 33.5
2686 Male, age 75, right hemisphere 32.6
Hippocampus, CA1
nTPM: 35.7
2082 Female, age 91, right hemisphere 37.9
2749 Male, age 80, left hemisphere 37.5
2527 Male, age 74, both hemispheres 36.6
2045 Male, age 76, both hemispheres 34.8
1873 Female, age 85, both hemispheres 31.9
Hippocampus, CA2
nTPM: 37.6
2249 Male, age 74, both hemispheres 41.6
1963 Male, age 80, left hemisphere 41.0
1892 Male, age 76, both hemispheres 37.8
1940 Female, age 85, left hemisphere 37.2
2437 Female, age 94, left hemisphere 35.3
2113 Female, age 91, right hemisphere 32.7
Hippocampus, CA3
nTPM: 36.5
2137 Male, age 80, left hemisphere 42.8
1891 Female, age 85, both hemispheres 37.1
2620 Female, age 94, left hemisphere 36.4
1867 Male, age 76, both hemispheres 35.5
2436 Male, age 74, both hemispheres 35.2
2861 Female, age 67, both hemispheres 32.1
Parahippocampal cortex
nTPM: 34.9
1990 Female, age 91, right hemisphere 38.8
2245 Female, age 91, both hemispheres 38.7
2693 Female, age 94, both hemispheres 36.7
1933 Female, age 85, both hemispheres 35.3
2018 Male, age 76, both hemispheres 34.5
2692 Male, age 74, both hemispheres 34.4
1850 Male, age 80, both hemispheres 33.3
2250 Female, age 67, right hemisphere 32.5
2532 Female, age 72, left hemisphere 32.5
2622 Female, age 67, right hemisphere 31.8
Perirhinal gyrus
nTPM: 36.2
1794 Male, age 80, right hemisphere 40.0
1847 Female, age 91, left hemisphere 38.4
1841 Female, age 85, right hemisphere 36.1
2848 Male, age 76, right hemisphere 33.5
2521 Female, age 94, right hemisphere 32.8
Subiculum
nTPM: 37.2
1901 Male, age 80, both hemispheres 42.0
2042 Male, age 76, both hemispheres 38.0
2729 Female, age 91, right hemisphere 37.2
1977 Female, age 85, both hemispheres 35.8
2438 Female, age 94, left hemisphere 35.5
2619 Male, age 74, both hemispheres 34.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.3
Samples: 197

Max nTPM: 103.0
Min nTPM: 15.7
Std nTPM: 14.0
Median nTPM: 36.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 103.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 81.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 77.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 74.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 72.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 71.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 71.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 70.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 68.4
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 67.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 65.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 5.1
FF:10153-102I9 76 years, female 9.2
FF:10169-103B7 60 years, female 1.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 100.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 81.3
Samples: 4

Max nTPM: 90.4
Min nTPM: 72.6
Sample A Male 87.0
Sample B Male 72.6
Sample C Female 90.4
Sample D Female 75.3
Hippocampal formation
nTPM: 100.6
Samples: 4

Max nTPM: 105.4
Min nTPM: 93.1
Sample A Male 101.8
Sample B Male 93.1
Sample C Female 102.0
Sample D Female 105.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70194019 Antisense, RP_050517_01_D09, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.