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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:47.8 nTPM
HPA:47.8 nTPM
GTEx:45.7 nTPM
FANTOM5:126.7 Scaled Tags Per Million
Pig:56.6 nTPM
Mouse:108.3 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028647
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.8
Sample id Sample description nTPM
Hippocampus
nTPM: 45.7
1911 Female, age 85, right hemisphere 46.7
1855 Male, age 76, left hemisphere 46.5
1898 Male, age 80, left hemisphere 45.8
2148 Female, age 91, left hemisphere 45.4
2529 Female, age 94, left hemisphere 45.4
2621 Female, age 67, right hemisphere 44.7
Dentate gyrus
nTPM: 45.9
2528 Male, age 74, both hemispheres 46.9
2010 Male, age 76, both hemispheres 46.7
2246 Female, age 85, both hemispheres 46.5
2530 Female, age 94, left hemisphere 45.7
1927 Female, age 91, both hemispheres 44.8
2531 Female, age 67, both hemispheres 44.7
Entorhinal gyrus
nTPM: 45.9
2117 Female, age 91, right hemisphere 48.2
2686 Male, age 75, right hemisphere 46.7
2764 Male, age 80, right hemisphere 46.3
1938 Female, age 85, left hemisphere 45.5
1787 Male, age 76, left hemisphere 45.2
2613 Female, age 94, left hemisphere 43.4
Hippocampus, CA1
nTPM: 46.0
2082 Female, age 91, right hemisphere 47.2
2527 Male, age 74, both hemispheres 46.9
1873 Female, age 85, both hemispheres 46.2
2749 Male, age 80, left hemisphere 45.1
2045 Male, age 76, both hemispheres 44.9
Hippocampus, CA2
nTPM: 46.7
2249 Male, age 74, both hemispheres 48.1
1940 Female, age 85, left hemisphere 47.2
1892 Male, age 76, both hemispheres 46.5
2113 Female, age 91, right hemisphere 46.3
2437 Female, age 94, left hemisphere 46.2
1963 Male, age 80, left hemisphere 46.1
Hippocampus, CA3
nTPM: 46.0
1891 Female, age 85, both hemispheres 50.0
1867 Male, age 76, both hemispheres 46.5
2436 Male, age 74, both hemispheres 45.7
2620 Female, age 94, left hemisphere 45.5
2137 Male, age 80, left hemisphere 44.7
2861 Female, age 67, both hemispheres 43.8
Parahippocampal cortex
nTPM: 46.5
2692 Male, age 74, both hemispheres 48.8
1850 Male, age 80, both hemispheres 47.6
1933 Female, age 85, both hemispheres 47.5
2532 Female, age 72, left hemisphere 47.1
1990 Female, age 91, right hemisphere 47.0
2693 Female, age 94, both hemispheres 46.7
2245 Female, age 91, both hemispheres 45.5
2250 Female, age 67, right hemisphere 45.5
2018 Male, age 76, both hemispheres 45.4
2622 Female, age 67, right hemisphere 43.7
Perirhinal gyrus
nTPM: 46.0
2521 Female, age 94, right hemisphere 47.0
1841 Female, age 85, right hemisphere 46.4
1794 Male, age 80, right hemisphere 46.2
1847 Female, age 91, left hemisphere 45.2
2848 Male, age 76, right hemisphere 45.1
Subiculum
nTPM: 47.8
2042 Male, age 76, both hemispheres 51.2
1901 Male, age 80, both hemispheres 49.2
1977 Female, age 85, both hemispheres 47.9
2619 Male, age 74, both hemispheres 46.9
2438 Female, age 94, left hemisphere 46.4
2729 Female, age 91, right hemisphere 44.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.7
Samples: 197

Max nTPM: 76.6
Min nTPM: 31.5
Std nTPM: 7.3
Median nTPM: 43.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 76.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 73.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 72.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 65.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 64.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 64.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 63.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 63.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 63.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 61.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 59.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 126.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 126.7
FF:10169-103B7 60 years, female 131.8
FF:10153-102I9 76 years, female 121.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.6
Samples: 4

Max nTPM: 71.7
Min nTPM: 42.8
Sample A Female 71.7
Sample B Female 53.6
Sample C Male 58.3
Sample D Male 42.8
Entorhinal cortex
nTPM: 48.8
Samples: 4

Max nTPM: 51.0
Min nTPM: 44.1
Sample A Female 49.9
Sample B Female 50.1
Sample C Male 51.0
Sample D Male 44.1
Subiculum
nTPM: 51.3
Samples: 4

Max nTPM: 59.9
Min nTPM: 45.8
Sample A Female 59.9
Sample B Female 52.4
Sample C Male 46.9
Sample D Male 45.8
Ventral hippocampus
nTPM: 52.7
Samples: 4

Max nTPM: 61.5
Min nTPM: 45.3
Sample A Female 61.5
Sample B Female 45.3
Sample C Male 55.7
Sample D Male 48.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 108.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 108.3
Samples: 4

Max nTPM: 109.8
Min nTPM: 106.9
Sample A Male 107.2
Sample B Male 109.8
Sample C Female 109.3
Sample D Female 106.9
Hippocampal formation
nTPM: 107.7
Samples: 4

Max nTPM: 114.6
Min nTPM: 101.9
Sample A Male 114.6
Sample B Male 103.6
Sample C Female 110.7
Sample D Female 101.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69134556 Antisense, RP_050321_03_B03, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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