Brain tissue expression of CHTOP in retina

RETINA - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

Consensus:	59.9	nTPM
GTEx:	59.9	nTPM
FANTOM5:	71.9	Scaled Tags Per Million

Pig:	65.0	nTPM
Mouse:	166.7	nTPM

RETINA - GTEx RNA-seqⁱ

Average nTPM	59.9

GTEx sample id

Sample description

nTPM

Retina
Average nTPM: 59.9

Samples: 105

Max nTPM: 84.2
Min nTPM: 44.2
Std nTPM: 7.2
Median nTPM:

308_1	70 years, female	84.2
413_1	59 years, female	79.6
466_1	57 years, female	79.5
414_1	84 years, female	76.0
415_1	77 years, female	73.1
499_1	55 years, female	72.6
162_1	79 years, female	71.7
149_1	88 years, male	71.0
495_1	57 years, female	70.8
126_1	63 years, male	69.9
394_1	75 years, female	69.8
317_1	60 years, male	69.1
501_1	88 years, male	68.7
42_1	85 years, male	68.6
89_1	63 years, male	68.6
266_1	85 years, male	67.9
99_1	64 years, male	66.7
265_1	87 years, male	66.2
307_1	66 years, female	66.1
313_1	79 years, female	65.5
315_1	62 years, female	64.6
324_1	76 years, male	64.3
503_1	68 years, male	64.1
350_1	84 years, female	63.8
153_1	70 years, female	63.6
355_1	70 years, female	63.6
377_1	82 years, female	63.6
352_1	62 years, male	63.5
218_1	71 years, female	63.3
490_1	67 years, female	63.2
137_1	83 years, male	62.6
254_1	77 years, female	62.6
115_1	83 years, male	62.4
142_1	61 years, female	62.4
319_1	81 years, male	62.4
246_1	77 years, male	62.3
356_1	87 years, female	62.2
119_1	70 years, female	61.9
384_1	83 years, male	61.9
35_1	74 years, female	61.4
491_1	89 years, female	61.2
18_1	88 years, male	61.1
349_1	83 years, male	61.1
109_1	81 years, female	61.0
32_1	67 years, male	60.2
293_1	68 years, female	60.2
172_1	72 years, female	59.9
189_1	76 years, male	59.7
117_1	61 years, male	59.6
288_1	66 years, female	59.6
376_1	75 years, female	59.6
292_1	71 years, male	59.3
347_1	72 years, male	59.3
353_1	82 years, female	59.0
386_1	76 years, male	58.8
4_1	88 years, female	58.7
354_1	81 years, female	58.7
17_1	71 years, male	58.6
2_1	77 years, female	58.0
468_1	89 years, male	58.0
41_1	94 years, female	57.7
145_1	84 years, male	57.7
404_1	82 years, female	57.6
526_1	61 years, male	57.3
517_1	88 years, male	57.1
518_1	75 years, female	57.1
311_1	78 years, male	57.0
335_1	73 years, female	56.9
379_1	60 years, male	56.3
43_1	64 years, female	56.1
177_1	74 years, male	55.7
425_1	59 years, female	55.6
406_1	79 years, male	55.3
163_1	78 years, male	55.2
243_1	75 years, male	55.2
251_1	78 years, male	55.2
321_1	62 years, female	55.1
9_1	66 years, female	54.9
229_1	69 years, female	54.9
396_1	62 years, male	54.9
405_1	91 years, male	54.9
375_1	74 years, female	54.7
120_1	70 years, female	54.5
291_1	76 years, male	54.3
389_1	86 years, female	54.3
351_1	91 years, male	54.1
295_1	61 years, female	53.8
264_1	73 years, female	53.2
217_1	76 years, male	53.1
81_1	67 years, male	52.8
173_1	67 years, male	52.7
139_1	64 years, female	52.3
480_1	63 years, male	51.8
506_1	65 years, male	51.8
452_1	88 years, female	51.2
447_1	81 years, male	50.9
318_1	68 years, male	50.8
320_1	89 years, female	49.8
314_1	67 years, male	49.5
286_1	68 years, female	49.0
316_1	62 years, male	48.9
6_1	73 years, female	48.0
237_1	82 years, male	47.8
348_1	84 years, male	47.1
322_1	76 years, male	44.2
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RETINA - FANTOM5 CAGEⁱ

Max Scaled Tags Per Million	71.9

FANTOM5 sample id

Sample description

Scaled Tags Per Million

Retina
Scaled Tags Per Million: 71.9

FF:10030-101E3

24-65 years, mixed

71.9

RETINA - Pig RNA-seqⁱ

Average nTPM	65.0

Pig sample

Sample description

nTPM

Retina
nTPM: 65.0

Samples: 4

Max nTPM: 70.4
Min nTPM: 59.1

Sample A	Female	65.3
Sample B	Female	65.2
Sample C	Male	70.4
Sample D	Male	59.1

RETINA - Mouse RNA-seqⁱ

Average nTPM	166.7

Mouse sample

Sample description

nTPM

Retina
nTPM: 166.8

Samples: 4

Max nTPM: 185.4
Min nTPM: 153.8

Sample A	Male	160.9
Sample B	Male	166.9
Sample C	Female	185.4
Sample D	Female	153.8