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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:39.8 nTPM
HPA:39.8 nTPM
GTEx:37.0 nTPM
FANTOM5:0.0 Scaled Tags Per Million
Pig:13.9 nTPM
Mouse:53.8 nTPM
Allen mouse:5.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056814
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.8
Sample id Sample description nTPM
Hippocampus
nTPM: 39.5
2621 Female, age 67, right hemisphere 40.1
1898 Male, age 80, left hemisphere 39.9
2529 Female, age 94, left hemisphere 39.9
1911 Female, age 85, right hemisphere 39.3
2148 Female, age 91, left hemisphere 39.1
1855 Male, age 76, left hemisphere 38.8
Dentate gyrus
nTPM: 39.4
2530 Female, age 94, left hemisphere 41.0
1927 Female, age 91, both hemispheres 39.8
2246 Female, age 85, both hemispheres 39.3
2528 Male, age 74, both hemispheres 39.1
2010 Male, age 76, both hemispheres 38.8
2531 Female, age 67, both hemispheres 38.6
Entorhinal gyrus
nTPM: 39.7
1787 Male, age 76, left hemisphere 40.8
2764 Male, age 80, right hemisphere 40.5
1938 Female, age 85, left hemisphere 39.7
2613 Female, age 94, left hemisphere 39.4
2117 Female, age 91, right hemisphere 39.0
2686 Male, age 75, right hemisphere 39.0
Hippocampus, CA1
nTPM: 39.4
2749 Male, age 80, left hemisphere 42.8
2045 Male, age 76, both hemispheres 39.0
1873 Female, age 85, both hemispheres 38.8
2082 Female, age 91, right hemisphere 38.5
2527 Male, age 74, both hemispheres 37.9
Hippocampus, CA2
nTPM: 38.8
1963 Male, age 80, left hemisphere 40.1
2437 Female, age 94, left hemisphere 39.6
1892 Male, age 76, both hemispheres 38.9
1940 Female, age 85, left hemisphere 38.5
2113 Female, age 91, right hemisphere 38.5
2249 Male, age 74, both hemispheres 37.1
Hippocampus, CA3
nTPM: 39.8
2861 Female, age 67, both hemispheres 41.4
2137 Male, age 80, left hemisphere 41.0
1867 Male, age 76, both hemispheres 39.7
2620 Female, age 94, left hemisphere 39.5
2436 Male, age 74, both hemispheres 39.0
1891 Female, age 85, both hemispheres 38.2
Parahippocampal cortex
nTPM: 38.7
2532 Female, age 72, left hemisphere 39.8
1850 Male, age 80, both hemispheres 39.4
1933 Female, age 85, both hemispheres 39.2
2245 Female, age 91, both hemispheres 39.2
1990 Female, age 91, right hemisphere 38.9
2018 Male, age 76, both hemispheres 38.6
2250 Female, age 67, right hemisphere 38.5
2622 Female, age 67, right hemisphere 38.0
2693 Female, age 94, both hemispheres 37.9
2692 Male, age 74, both hemispheres 37.5
Perirhinal gyrus
nTPM: 39.3
1794 Male, age 80, right hemisphere 40.5
1841 Female, age 85, right hemisphere 40.0
2521 Female, age 94, right hemisphere 38.9
2848 Male, age 76, right hemisphere 38.6
1847 Female, age 91, left hemisphere 38.5
Subiculum
nTPM: 38.9
1977 Female, age 85, both hemispheres 40.7
1901 Male, age 80, both hemispheres 39.9
2438 Female, age 94, left hemisphere 38.9
2729 Female, age 91, right hemisphere 38.3
2619 Male, age 74, both hemispheres 38.0
2042 Male, age 76, both hemispheres 37.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.0
Samples: 197

Max nTPM: 81.6
Min nTPM: 20.6
Std nTPM: 9.1
Median nTPM: 35.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 81.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 76.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 66.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 63.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 61.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 61.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 59.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 55.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 53.8
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 52.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 52.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.0
FF:10169-103B7 60 years, female 0.0
FF:10153-102I9 76 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 16.0
Min nTPM: 12.5
Sample A Female 12.5
Sample B Female 13.9
Sample C Male 13.3
Sample D Male 16.0
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 13.8
Min nTPM: 12.2
Sample A Female 12.2
Sample B Female 13.8
Sample C Male 13.3
Sample D Male 13.0
Subiculum
nTPM: 13.3
Samples: 4

Max nTPM: 13.9
Min nTPM: 12.6
Sample A Female 13.9
Sample B Female 13.3
Sample C Male 13.2
Sample D Male 12.6
Ventral hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 14.0
Min nTPM: 12.6
Sample A Female 12.6
Sample B Female 14.0
Sample C Male 12.7
Sample D Male 13.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.7
Samples: 4

Max nTPM: 49.9
Min nTPM: 43.1
Sample A Male 44.7
Sample B Male 49.9
Sample C Female 43.1
Sample D Female 45.2
Hippocampal formation
nTPM: 53.8
Samples: 4

Max nTPM: 58.4
Min nTPM: 50.2
Sample A Male 50.8
Sample B Male 50.2
Sample C Female 55.7
Sample D Female 58.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.9
74990523 Antisense, RP_060410_01_C06, Mouse strain C57BL/6J (56 days, male) 5.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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