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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:144.4 nTPM
HPA:144.4 nTPM
GTEx:73.3 nTPM
FANTOM5:112.7 Scaled Tags Per Million
Pig:35.3 nTPM
Mouse:33.9 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006949
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 144.4
Sample id Sample description nTPM
Hippocampus
nTPM: 144.4
2529 Female, age 94, left hemisphere 159.6
2148 Female, age 91, left hemisphere 148.6
1911 Female, age 85, right hemisphere 146.4
1898 Male, age 80, left hemisphere 141.8
1855 Male, age 76, left hemisphere 137.8
2621 Female, age 67, right hemisphere 132.2
Dentate gyrus
nTPM: 133.1
2528 Male, age 74, both hemispheres 149.8
2246 Female, age 85, both hemispheres 138.0
2010 Male, age 76, both hemispheres 131.6
2530 Female, age 94, left hemisphere 129.1
1927 Female, age 91, both hemispheres 125.5
2531 Female, age 67, both hemispheres 124.6
Entorhinal gyrus
nTPM: 131.0
2117 Female, age 91, right hemisphere 150.5
1787 Male, age 76, left hemisphere 130.2
1938 Female, age 85, left hemisphere 129.2
2764 Male, age 80, right hemisphere 128.7
2686 Male, age 75, right hemisphere 127.7
2613 Female, age 94, left hemisphere 119.8
Hippocampus, CA1
nTPM: 138.5
2527 Male, age 74, both hemispheres 157.4
2082 Female, age 91, right hemisphere 147.1
1873 Female, age 85, both hemispheres 143.1
2045 Male, age 76, both hemispheres 126.4
2749 Male, age 80, left hemisphere 118.2
Hippocampus, CA2
nTPM: 136.5
2249 Male, age 74, both hemispheres 154.7
2113 Female, age 91, right hemisphere 151.0
1940 Female, age 85, left hemisphere 135.2
1963 Male, age 80, left hemisphere 132.6
2437 Female, age 94, left hemisphere 128.3
1892 Male, age 76, both hemispheres 117.3
Hippocampus, CA3
nTPM: 143.1
2436 Male, age 74, both hemispheres 189.6
2620 Female, age 94, left hemisphere 141.5
1891 Female, age 85, both hemispheres 141.2
2861 Female, age 67, both hemispheres 136.4
1867 Male, age 76, both hemispheres 127.0
2137 Male, age 80, left hemisphere 122.7
Parahippocampal cortex
nTPM: 131.7
2692 Male, age 74, both hemispheres 143.4
2622 Female, age 67, right hemisphere 138.5
2018 Male, age 76, both hemispheres 135.9
1933 Female, age 85, both hemispheres 133.3
2245 Female, age 91, both hemispheres 133.0
1990 Female, age 91, right hemisphere 131.4
2250 Female, age 67, right hemisphere 130.6
1850 Male, age 80, both hemispheres 125.8
2693 Female, age 94, both hemispheres 123.9
2532 Female, age 72, left hemisphere 120.9
Perirhinal gyrus
nTPM: 127.2
1841 Female, age 85, right hemisphere 131.6
1794 Male, age 80, right hemisphere 129.8
1847 Female, age 91, left hemisphere 129.1
2521 Female, age 94, right hemisphere 126.6
2848 Male, age 76, right hemisphere 118.8
Subiculum
nTPM: 137.2
2619 Male, age 74, both hemispheres 151.9
2729 Female, age 91, right hemisphere 151.8
1977 Female, age 85, both hemispheres 130.4
2042 Male, age 76, both hemispheres 130.4
1901 Male, age 80, both hemispheres 129.6
2438 Female, age 94, left hemisphere 128.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.3
Samples: 197

Max nTPM: 188.9
Min nTPM: 22.4
Std nTPM: 33.1
Median nTPM: 64.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 188.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 182.8
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 167.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 156.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 154.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 148.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 146.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 140.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 140.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 139.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 138.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 112.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 112.7
FF:10153-102I9 76 years, female 162.6
FF:10169-103B7 60 years, female 62.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.1
Samples: 4

Max nTPM: 34.4
Min nTPM: 24.2
Sample A Female 34.4
Sample B Female 33.0
Sample C Male 32.8
Sample D Male 24.2
Entorhinal cortex
nTPM: 27.0
Samples: 4

Max nTPM: 29.9
Min nTPM: 21.8
Sample A Female 26.6
Sample B Female 29.9
Sample C Male 29.8
Sample D Male 21.8
Subiculum
nTPM: 33.4
Samples: 4

Max nTPM: 36.0
Min nTPM: 29.6
Sample A Female 36.0
Sample B Female 34.9
Sample C Male 33.1
Sample D Male 29.6
Ventral hippocampus
nTPM: 35.3
Samples: 4

Max nTPM: 47.0
Min nTPM: 30.9
Sample A Female 31.9
Sample B Female 30.9
Sample C Male 47.0
Sample D Male 31.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.8
Samples: 4

Max nTPM: 35.5
Min nTPM: 28.5
Sample A Male 32.2
Sample B Male 28.5
Sample C Female 34.9
Sample D Female 35.5
Hippocampal formation
nTPM: 33.9
Samples: 4

Max nTPM: 43.6
Min nTPM: 29.3
Sample A Male 31.0
Sample B Male 29.3
Sample C Female 31.6
Sample D Female 43.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
532728 Antisense, RP_040825_01_H01, Mouse strain C57BL/6J (56 days, male) 0.7
70919633 Antisense, RP_050713_01_G03, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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