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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:102.2 nTPM
HPA:102.2 nTPM
GTEx:73.9 nTPM
FANTOM5:71.8 Scaled Tags Per Million
Pig:192.4 nTPM
Mouse:126.0 nTPM
Allen mouse:7.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 102.2
Sample id Sample description nTPM
Hippocampus
nTPM: 101.2
1898 Male, age 80, left hemisphere 104.8
2621 Female, age 67, right hemisphere 102.9
1855 Male, age 76, left hemisphere 102.4
2529 Female, age 94, left hemisphere 100.8
1911 Female, age 85, right hemisphere 99.1
2148 Female, age 91, left hemisphere 97.2
Dentate gyrus
nTPM: 100.8
2010 Male, age 76, both hemispheres 103.3
2530 Female, age 94, left hemisphere 102.6
1927 Female, age 91, both hemispheres 100.6
2528 Male, age 74, both hemispheres 100.5
2531 Female, age 67, both hemispheres 99.3
2246 Female, age 85, both hemispheres 98.4
Entorhinal gyrus
nTPM: 100.8
1787 Male, age 76, left hemisphere 103.0
1938 Female, age 85, left hemisphere 101.4
2764 Male, age 80, right hemisphere 101.4
2117 Female, age 91, right hemisphere 101.1
2613 Female, age 94, left hemisphere 99.2
2686 Male, age 75, right hemisphere 98.4
Hippocampus, CA1
nTPM: 100.3
2749 Male, age 80, left hemisphere 103.4
2045 Male, age 76, both hemispheres 101.5
1873 Female, age 85, both hemispheres 99.7
2527 Male, age 74, both hemispheres 98.5
2082 Female, age 91, right hemisphere 98.3
Hippocampus, CA2
nTPM: 100.4
1892 Male, age 76, both hemispheres 104.4
2437 Female, age 94, left hemisphere 100.6
1963 Male, age 80, left hemisphere 100.5
1940 Female, age 85, left hemisphere 100.1
2113 Female, age 91, right hemisphere 99.0
2249 Male, age 74, both hemispheres 97.9
Hippocampus, CA3
nTPM: 101.3
1867 Male, age 76, both hemispheres 104.1
2861 Female, age 67, both hemispheres 102.9
2436 Male, age 74, both hemispheres 101.2
2620 Female, age 94, left hemisphere 100.2
1891 Female, age 85, both hemispheres 99.8
2137 Male, age 80, left hemisphere 99.6
Parahippocampal cortex
nTPM: 100.1
2018 Male, age 76, both hemispheres 104.8
1850 Male, age 80, both hemispheres 101.4
1933 Female, age 85, both hemispheres 101.2
2692 Male, age 74, both hemispheres 101.0
2250 Female, age 67, right hemisphere 100.6
1990 Female, age 91, right hemisphere 99.7
2622 Female, age 67, right hemisphere 99.2
2245 Female, age 91, both hemispheres 98.5
2532 Female, age 72, left hemisphere 97.8
2693 Female, age 94, both hemispheres 97.0
Perirhinal gyrus
nTPM: 102.2
1847 Female, age 91, left hemisphere 104.9
1794 Male, age 80, right hemisphere 102.7
1841 Female, age 85, right hemisphere 102.2
2521 Female, age 94, right hemisphere 101.1
2848 Male, age 76, right hemisphere 100.1
Subiculum
nTPM: 100.5
2042 Male, age 76, both hemispheres 102.8
2619 Male, age 74, both hemispheres 101.2
1977 Female, age 85, both hemispheres 100.3
1901 Male, age 80, both hemispheres 100.1
2438 Female, age 94, left hemisphere 100.1
2729 Female, age 91, right hemisphere 98.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.9
Samples: 197

Max nTPM: 125.3
Min nTPM: 52.0
Std nTPM: 11.7
Median nTPM: 72.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 125.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 124.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 116.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 108.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 104.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 100.1
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 99.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 99.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 98.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 96.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 96.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.8
FF:10169-103B7 60 years, female 81.6
FF:10153-102I9 76 years, female 62.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 192.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 192.4
Samples: 4

Max nTPM: 239.2
Min nTPM: 146.6
Sample A Female 239.2
Sample B Female 187.0
Sample C Male 196.9
Sample D Male 146.6
Entorhinal cortex
nTPM: 149.4
Samples: 4

Max nTPM: 169.8
Min nTPM: 119.4
Sample A Female 156.0
Sample B Female 169.8
Sample C Male 152.3
Sample D Male 119.4
Subiculum
nTPM: 158.6
Samples: 4

Max nTPM: 190.3
Min nTPM: 131.7
Sample A Female 190.3
Sample B Female 157.4
Sample C Male 131.7
Sample D Male 155.0
Ventral hippocampus
nTPM: 172.4
Samples: 4

Max nTPM: 207.4
Min nTPM: 139.1
Sample A Female 162.2
Sample B Female 139.1
Sample C Male 207.4
Sample D Male 180.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 126.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 121.8
Samples: 4

Max nTPM: 130.3
Min nTPM: 112.5
Sample A Male 112.5
Sample B Male 120.5
Sample C Female 130.3
Sample D Female 124.0
Hippocampal formation
nTPM: 126.0
Samples: 4

Max nTPM: 136.3
Min nTPM: 111.2
Sample A Male 136.3
Sample B Male 111.2
Sample C Female 134.6
Sample D Female 121.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.4
76081939 Antisense, RP_060626_01_B02, Mouse strain C57BL/6J (56 days, male) 7.8
77620333 Antisense, RP_070205_01_B07, Mouse strain C57BL/6J (56 days, male) 7.2
121097 Antisense, RP_040507_01_A03, Mouse strain C57BL/6J (56 days, male) 7.2
77869814 Antisense, RP_070205_01_B07, Mouse strain C57BL/6J (56 days, male) 2.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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